Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq785 107 2e-18
seq6691 87.8 2e-12
>seq785
Length=396209
Score = 107 bits (118), Expect = 2e-18
Identities = 257/383 (67%), Gaps = 8/383 (2%)
Strand=Plus/Minus
Query 11496 AATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTT 11555
|| || ||| ||||||||||| || || || | || ||||||| || ||||||
Sbjct 105808 AACCTGACGGTCGAAACGACCCGGACGCAGCAATGCCGGGTCAAGAACGTCAGGACGGTT 105749
Query 11556 TGTAGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAG 11615
|| || ||||| || | || || | | ||||| || |||||||| | |
Sbjct 105748 AGTTGCTGCAATTACGATGATACCTTCGTTACCTTCGAAGCCATCCATTTCAACCAACAT 105689
Query 11616 CTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACC---ACCTGCCGAACGCTT 11672
|||||| | ||||||||||| ||||||| || || ||| |||||| |||||
Sbjct 105688 CTGGTTCAGTGTCTGTTCACGTTCATCGT--GACCGCC-ACCTAAACCTGCACCACGCTG 105632
Query 11673 CTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTT-GGTTGGCACGTGCCT 11731
|| || ||||| ||||||||||| || | |||||| || || | | ||||
Sbjct 105631 ACGGCCAACGGCGTCGATCTCATCGATAAAGATGATACATGGAGCGGCTTTCTTC-GCCT 105573
Query 11732 GTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG 11791
||||||| | ||||| ||||| || || ||||| |||||||| || ||||||| |
Sbjct 105572 GTTCGAACATGTCACGCACACGAGATGCACCGACACCCACGAACATTTCTACGAAGTCAG 105513
Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAG 11851
| ||| | || ||| || || || | || || || |||||| || || | |
Sbjct 105512 AACCGGAAATCGTAAAGAATGGCACTTTGGCTTCGCCGGCAATGGCTTTCGCCAGCAAGG 105453
Query 11852 TCTTACCCGTACCAGGTGCACCA 11874
| ||||| ||||| || | ||||
Sbjct 105452 TTTTACCGGTACCCGGAGGACCA 105430
>seq6691
Length=42033
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/204 (70%), Gaps = 3/204 (1%)
Strand=Plus/Plus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || || || || || ||||| | ||| || |||||| | ||
Sbjct 14212 GGCAAAGTCGCAGTGGAGACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCC 14271
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
|||||||| || | ||||| ||||||||||||| |||||| || || ||||||||
Sbjct 14272 GGGCATGAGGCCACGCTTCTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGAT 14331
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA--AGGTCGAGAC-TTGTCGAA 119671
|| || || || ||||| || | | |||||| | || || || | | || |||
Sbjct 14332 TCCTTCTACGCAAGCGAAGGCCACCACACGCTCCCCGAAGGTGGCCGTGTCGCTGCCGAT 14391
Query 119672 CCACTTGAGAGCCCAGTTGGCCTT 119695
||||| || ||||||| |||||
Sbjct 14392 CCACTGCAGGGCCCAGTCTGCCTT 14415
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588469230325200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |