Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq785 89.7 8e-13 >seq785 Length=396209 Score = 89.7 bits (98), Expect = 8e-13 Identities = 212/318 (67%), Gaps = 3/318 (1%) Strand=Plus/Plus Query 29665 TCTAGTGCAATTCTAGGAAGATTCAGAGTAATCACACCCAAGTTTTGACGACCATCGTGG 29724 || || ||||| | || |||||||| | ||||| || | || | || || |||||| Sbjct 142243 TCCAGCGCAATACGCGGCAGATTCAGGCTGATCACGCCGATATTATTGCGGCCCTCGTGG 142302 Query 29725 ATCTCTTCACCATGTTCATTTTCCCATCGACCCAAGAATGAACGACAACCCATGGGGGAT 29784 ||| || |||| ||| | | | || |||| ||| || || ||||| || | | Sbjct 142303 ATCATCTCGCCATTTTCTTCATACA--CG-CCCAGGAAACTGCGGCAGCCCATCGGCGTT 142359 Query 29785 TTATAAGAACCTGTGACCTTTACCACTTGATCGTAACTCATAATATCCGGATATATACGC 29844 || | ||||||||||| || ||||| ||||| ||| | | || ||||| || |||||| Sbjct 142360 TTGAACGAACCTGTGACTTTCACCACCTGATCATAATTGAGGATGTCCGGGTACATACGC 142419 Query 29845 TTAGACGAACACTCAAGAGCAAGTTGTTTTATATCGTAATGAGGATCCCAAGGATTCAGA 29904 || | || || || || ||||| || || ||||| | | || | | || || Sbjct 142420 TTGCTGGCGCATTCCAGTGCCAGTTGCTTGATGTCGTAGTTGGCGTCACCGGCTTTATGA 142479 Query 29905 TTAAGACCGTCTTTAAGAGTGAATACAAGTTTAGGAAATACAGCAGTTTCTTTATCTTCA 29964 || || ||||| | | || || ||||| || |||||||| |||| || || Sbjct 142480 TTCAGGCCGTCACGGATGGCAAACACCAGTTTTGGGAATACAGCGGTTTTGCGATTTTTG 142539 Query 29965 CCAAGTCCATCAATACGG 29982 || ||||| |||| ||| Sbjct 142540 CCCAGTCCGGCAATGCGG 142557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751957240014960