Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_015251.1
Length=235229
Score E
Sequences producing significant alignments: (Bits) Value
seq785 89.7 8e-13
>seq785
Length=396209
Score = 89.7 bits (98), Expect = 8e-13
Identities = 212/318 (67%), Gaps = 3/318 (1%)
Strand=Plus/Plus
Query 29665 TCTAGTGCAATTCTAGGAAGATTCAGAGTAATCACACCCAAGTTTTGACGACCATCGTGG 29724
|| || ||||| | || |||||||| | ||||| || | || | || || ||||||
Sbjct 142243 TCCAGCGCAATACGCGGCAGATTCAGGCTGATCACGCCGATATTATTGCGGCCCTCGTGG 142302
Query 29725 ATCTCTTCACCATGTTCATTTTCCCATCGACCCAAGAATGAACGACAACCCATGGGGGAT 29784
||| || |||| ||| | | | || |||| ||| || || ||||| || | |
Sbjct 142303 ATCATCTCGCCATTTTCTTCATACA--CG-CCCAGGAAACTGCGGCAGCCCATCGGCGTT 142359
Query 29785 TTATAAGAACCTGTGACCTTTACCACTTGATCGTAACTCATAATATCCGGATATATACGC 29844
|| | ||||||||||| || ||||| ||||| ||| | | || ||||| || ||||||
Sbjct 142360 TTGAACGAACCTGTGACTTTCACCACCTGATCATAATTGAGGATGTCCGGGTACATACGC 142419
Query 29845 TTAGACGAACACTCAAGAGCAAGTTGTTTTATATCGTAATGAGGATCCCAAGGATTCAGA 29904
|| | || || || || ||||| || || ||||| | | || | | || ||
Sbjct 142420 TTGCTGGCGCATTCCAGTGCCAGTTGCTTGATGTCGTAGTTGGCGTCACCGGCTTTATGA 142479
Query 29905 TTAAGACCGTCTTTAAGAGTGAATACAAGTTTAGGAAATACAGCAGTTTCTTTATCTTCA 29964
|| || ||||| | | || || ||||| || |||||||| |||| || ||
Sbjct 142480 TTCAGGCCGTCACGGATGGCAAACACCAGTTTTGGGAATACAGCGGTTTTGCGATTTTTG 142539
Query 29965 CCAAGTCCATCAATACGG 29982
|| ||||| |||| |||
Sbjct 142540 CCCAGTCCGGCAATGCGG 142557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751957240014960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |