Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq14927 334 2e-87 seq785 300 4e-77 >seq14927 Length=58641 Score = 334 bits (370), Expect = 2e-87 Identities = 945/1419 (67%), Gaps = 62/1419 (4%) Strand=Plus/Plus Query 15161 GGGTAAGGGGTTACAGGCCAATGGCGCGGCGCTGCTGTGCGAGACGATCGACGCCGCCGA 15220 |||| |||||||||||||| ||| ||| |||||||| | || || |||||||||| Sbjct 27971 GGGTTAGGGGTTACAGGCCGATGTTTTTGCGGTGCTGTGCCACGCGGTCAACGCCGCCGA 28030 Query 15221 CGACCTCGACGAAGTTCGGGACGTCGATCTCGATTAGCGTCTC-GCCGTTGCAGACGAGC 15279 ||| || || | |||| | |||| || || | ||||| ||||| || ||| Sbjct 28031 CGATTTCCACCATGTTCACGGTATCGACTTCAATCA-CGTCTTTGCCGTCAATCACCAGC 28089 Query 15280 CGGTAATACGA-CA--GGGACATCGTGCCGGTCTGGT--CGGCGTTGTCGCCGGCCTTGG 15334 | |||| | || ||| ||||| | |||| ||| || || || |||| Sbjct 28090 TTGAAATAGGTGCATTGGG---TCGTGAT--TTTGGTTTCGGTGTCTTCACCCTGCTTGT 28144 Query 15335 CCTTGCCGGGGTCGATTTCCTTGTAGCGGCCGCGCACGTACACTTCGACCGCGTCGACTT 15394 || |||| || ||||| || | ||| ||||||| | ||||| || ||| | | Sbjct 28145 ACTCGCCGAAATCCATTTCTTTATGGCGTCCGCGCAGGGTGACTTCCACGGCGGAGGTGT 28204 Query 15395 CCTCGGTGTCGTCGCGCTGATAGGAGCCAGCGAAACGTACGGTGACGCCGTCGACCTTCG 15454 | |||||||||||||||| |||| || || || || | | ||| | || ||| Sbjct 28205 CGCCGGTGTCGTCGCGCTGGAAGGATCCGGCAAAGCGCAGCGGCACGGCATCCACC---- 28260 Query 15455 ACGTGCCCCA-TGTCTTGAACATCTCCTTCATGAAGCC-GCCCATCGTC-AGGCCGAGCT 15511 | |||||| ||| || | || | ||||| |||| ||||| |||| | | || | Sbjct 28261 --GCGCCCCACTGT-TTCAGCACCAG-TTCATCCAGCCCGCCCACCGTCCACTCAAAGGT 28316 Query 15512 C----CATCTTC-TCCATGCCGAGGTCGATGTCGATCTCGG--CGTTCATGCCGCCGCCG 15564 | | || || |||| ||| | || || ||| || || |||||||||||||| Sbjct 28317 CAGCGCGTCATCGTCCAGGCCAAAATCAAT--CGAGGCCGAACCGGTCATGCCGCCGCCG 28374 Query 15565 CGATACGCTTCCATCTTGCGCGTGAGCTTCGGCAACTGGATTTCGGTGACTTCCCCGACG 15624 ||||| |||| |||||| ||||| ||||||| | | || |||| |||| | Sbjct 28375 CGATAGTTCTCCAGCTTGCGGGTGAGTTTCGGCAGCGTCAGCGCGCTGACCGTGCCGAGG 28434 Query 15625 AACGAGGTGCCGTCTTCGAAGACGTTGAAGTTCTTCAGTTTGGATGGCAGAGCCATTGCG 15684 | | | ||||| | || | ||| | || |||||||| ||||| ||||| | Sbjct 28435 TAGCTGTTCCCGTCGTTAAACAGGTTCAGGTATTTCAGTTTCTTAGGCAGTGCCAT---G 28491 Query 15685 TTTCCCTATGGTGAGTGTCGAGCGATCAGACCGCGATGCTTTGCGCGAACTTGACCAGAT 15744 ||| | | | | | ||| | | || | | || |||||| | |||| | Sbjct 28492 TTT-----TAGCGCCTCTT-AGCTGTTA-ACGGAGGTG------GCGAACGTCGCCAGGT 28538 Query 15745 AGCGGTCGGTGATGCGCTGGCGGAACGTCAGGTCTTCGAGCGGCGGGGCAGGGCAGAAGT 15804 | | |||||||||||||| || | || | ||||| |||||||| | || ||| Sbjct 28539 ACTGATCGGTGATGCGCTGACGCAGGGTTAAATCTTCCAGCGGCGGCACCGGCGTATAGT 28598 Query 15805 CGTAATCGATGAAGCCCTGGCCGGCCTTGAGCGAATCCTTGTCGTTCGCGCCCGGATCGA 15864 | ||||| ||||| || ||| || || || | || | |||||| | || ||| Sbjct 28599 CATAATCAATGAACAGCTTGCCCGCTTTCAGGGTGTCGACGGTGTTCGCTTCGGGGTCGT 28658 Query 15865 ACCAGCATTCGCCGTC---GATCAGGTAGCCGGCGGTCTTCCACGCGCGGAACTTCGCAT 15921 ||||||| || || |||||| ||||| | ||| |||| | ||| || | Sbjct 28659 ACCAGCAGGTACCATCAATGATCAGA---CCGGCAGATTTCATTTCGCGCAGCTTGGCGT 28715 Query 15922 TCACGCCATCGACGATGTCGCGCATCAGCGTGCGGCTCATCGGCTGGTCGACGGCCCACA 15981 | | ||| | | ||||| || ||||| || |||| ||| ||| | ||||||| Sbjct 28716 TAATGCCCGCAATCATGTCTTTGATAAGCGTCGGGGTCATTGGCCTGTCCATCGCCCACA 28775 Query 15982 TGTGCGCCTCGGCCATCGTGTCGGCGATCACCTGCGCACTGCGCACATAGTTCTCGAACG 16041 |||||| || ||||| ||||| || | ||||||||| |||| ||||||||| ||| Sbjct 28776 GGTGCGCTTCTGCCATGGTGTCCGCCAGCACCTGCGCGGTGCGGGTATAGTTCTCAAACA 28835 Query 16042 CCCACAGCTTGTCCTCGGAACAGGTGCGCGATCCCCATAGACGGTAA-CCGTCCGCGTTC 16100 ||||| || || || ||||||||| ||||| | || || ||||| | Sbjct 28836 GGAACAGCGGATCATCAGAGCAGGTGCGCTGCCCCCAGA-ACTTAAAGCCGTCTTTGCGG 28894 Query 16101 ACCAGCGTGGTCACTTCGTGGCTG-TTCAGGTAGCCCGCGTCGGTGTTCGGGTCCTGCAG 16159 | ||||||||||| | | ||| ||||| | | || |||||| | | ||||| Sbjct 28895 ATAAGCGTGGTCACG-CACGCCTGGTTCAGCAGGTCGGCATCGGTGCCGGTGGTCTGCAA 28953 Query 16160 GTCCCAGAACACG-TCGCGGCTGATGCCCGTGACGCCGTTGACCACGACGTTCGAGATCG 16218 |||||| ||||| | || | | ||| ||||||||||||| | | |||||||| | || Sbjct 28954 ATCCCAGTACACGCTGGCAGAC-AGGCCGGTGACGCCGTTGATCCCAACGTTCGAAAGCG 29012 Query 16219 TCTTGTGCCAGCCGATCTCTTCGTCGATCTTCGCGCGCATGCCGAGCGCGCGCGCCGTTG 16278 | || ||||||||| | ||| ||||||| || || |||| |||||||||| || || | Sbjct 29013 TTTTATGCCAGCCGGTTTCTGCGTCGATTTTGGCACGCAGGCCGAGCGCGTAAGCGGTGG 29072 Query 16279 CCCACGTGATGTCCTCGGCGTTGGTCGTGGTGTTCCAGTTCACGAAATCCGGCCAGATCG 16338 | || ||| || ||| ||||| |||||||||||| ||||||||| ||||||| Sbjct 29073 CGGGCGCGATATCGCTGGCATTGGTGGTGGTGTTCCAGGACACGAAATCAGGCCAGACAA 29132 Query 16339 TCATCAGCTCACGCTGGCCGAAGTTCGCGCGGTAGGTGGTCGCTTCCTCCTTCGTCTGTG 16398 ||||||||||||||||| ||| || ||||||| || | || || | || | || Sbjct 29133 CCATCAGCTCACGCTGGCTGAAATTGTCGCGGTACTTGATGGCATCGGAC-ACGGTTTTG 29191 Query 16399 C-GCCGAACGCGCTGATGTAGCCGAAGCCGCGCAGCTTCTGCGCGATCGTCGCAAGCTCG 16457 | |||| ||||||||| |||||| ||| |||| |||| ||| || | || ||| | Sbjct 29192 CAGCCGTACGCGCTGACGTAGCCAAAGGCGCGGAGCTGCTGACAGACGGCGGCGAGCGCC 29251 Query 16458 GACGCGACGGGCAGGGTGTCGAGGCCTGGACAACCGAGCACGCGCGGCTTCACGCCGAGG 16517 | ||||| | | | || || || || ||||| | ||||||||| |||||||| Sbjct 29252 GTAGCGACTTCCTGATTATCAAGCCCCGGCACGCCGAGAATGCGCGGCTTTACGCCGAGT 29311 Query 16518 CGGCTCTTCGCGGCGAGCAGCGCCTTCATACCGGTGTAC 16556 | | ||| | ||||| || ||||| ||||| ||| Sbjct 29312 TCAGTTTGCGCAGACAGCAGGGCTTTCATGCCGGTATAC 29350 Score = 248 bits (274), Expect = 2e-61 Identities = 581/864 (67%), Gaps = 42/864 (5%) Strand=Plus/Plus Query 32277 CTTCGACTATCAGCGCAACTGGTATCGCGCCGGCTTCAAGGAACGGATCCGCAACGTCCT 32336 |||| | ||||||||| |||||| ||| || | || | || |||||| || | || Sbjct 42899 CTTCCAGTATCAGCGCGTGTGGTATGACGCAGGGCTTAAACACCGTATCCGCGACATTCT 42958 Query 32337 GAAGAGCCGGCAGATCGGCGCGACCTGGTACTTCGCGCGCGAGGCGTTGCTCGACGCGCT 32396 || || || ||||||||||| | | ||| || ||||| || |||| ||| || Sbjct 42959 CAAATCGCGACAAATCGGCGCGACGTTCTTCTTTGCCCGCGAAGCTCTGCTGCGCGCCCT 43018 Query 32397 GAACACAGGCCGCAATCAAATCTTCCTGTCGGCCAGCAAGGCACAGGCGCACGTGTTCCG 32456 || |||| || || || |||||||| ||||| || | ||||| ||||||| || Sbjct 43019 AGCGACCGGCCATAACCAGATTTTCCTGTCAGCCAGTAAAACTCAGGCTTACGTGTTTCG 43078 Query 32457 CCAGTACATCGTGCAGTTCGCGAAAGACGC--GGTCGACGTCGAGCTGAAGGGCGACCCG 32514 | |||||| | ||||| || ||| ||| || || ||||||| ||| |||||| Sbjct 43079 TGAATACATCATTCAGTTTGCC-----CGCCAGGTTGATGTTGAGCTGACGGGTGACCCG 43133 Query 32515 ATCGTGCT--GCCG-AACGGTGCGACGCTGTACTTCCTCGGCACCAACGCGCGCACTGCG 32571 || ||| | || ||||| || | |||| ||| | ||||||||| | ||| || Sbjct 43134 ATTGTGATCGGCAACAACGGCGCAAAGCTGATTTTCTTAGGCACCAACTCCAACACCGCC 43193 Query 32572 CAGAGCTACCACGGCAACCTGTATTTCGACGAGTACTTCTGGGTGCCGCGCTTCCAGGAG 32631 || ||| | | ||| ||||||| | ||||| ||| ||| | ||| |||||| || Sbjct 43194 CAAAGCCATAATGGCGACCTGTACGTGGACGAAATCTTTTGGATCCCGAATTTCCAGAAG 43253 Query 32632 CTGCGCAAGGTCGCCTCCGGCATGGCGATTCACGACCAGTGGCGGCAGACGTATTTCTCG 32691 ||||||||||| ||| |||||||||| || || || ||| || |||||||| Sbjct 43254 CTGCGCAAGGTTGCCAGCGGCATGGCGTCGCAGGAACATCTGCGCACCACCTATTTCTCC 43313 Query 32692 ACGCCGTCGAGC-CTCGCGCACGACGCTTATCCGTTCTGGTCGGGCAAGCTGTTCAACCG 32750 || ||||| ||| || |||||| ||| |||||||||||||| || | ||||||||| Sbjct 43314 ACCCCGTC-AGCACTGACGCACGGCGCGTATCCGTTCTGGTCAGGAGAACTGTTCAACAA 43372 Query 32751 TGGCCGACCGAAAGATC---AGCAC-GTATCGA--TCGACATTTCGCACGCGGCGCTGGC 32804 | ||| | |||||| | || | || || | || || || || ||||| Sbjct 43373 GG---GACGGGAAGATCGCAATGACAGGATTGAGCTGGATATCAGCCATCACGCCCTGGC 43429 Query 32805 -CGCGGGCCG-TTCGTGTCAGGACGGCCAGTGGCGCCAGATCGTCACGGTCGAGGACGCC 32862 |||| | || | | | ||||| |||||||| || |||||||| | ||||| || Sbjct 43430 GAAAGGGCAGCTTTGCGGC--GACGGACAGTGGCGGCAAATCGTCACCATTGAGGATGCG 43487 Query 32863 GTGCGCGGCGGTTGCAACAGCGGGGCGCGGCCGCTCTTCAATCTCGACCGGCTACGACTG 32922 | ||| || |||||| || ||||| ||||| ||| || | Sbjct 43488 TTAGCCGGTGGCTGCAAC---------------CTGTTCAACATCGACACGCTGAAACAG 43532 Query 32923 GAATACAGCCCCGAGGAATACGCGAACCTGCTGCTGTGCCAGTTCATCGACGATTCGCTG 32982 || ||||| | ||||| | | || ||| | ||||| |||| | |||||| | | Sbjct 43533 GAGAACAGCGCGGAGGATTTCCGCAATCTGTTCATGTGCGAGTTTGTTGACGATCAGGCG 43592 Query 32983 TCGGTTTTCCCGCTGACGGTGTTGCAGCCGTGCATGGTCGATACCTGGGAGGTGTGGGAC 33042 || || |||||| | | | | |||| | |||||||| || | ||||| |||||| Sbjct 43593 TCCGTGTTCCCGTTCGCCGAGCTGCAACGCTGCATGGTGGAAAGTGCGGAGGAGTGGGAG 43652 Query 33043 GACTTCAAGCCACTGTAC-CTGCGCCCGTTCGGCGACGAGGAGGTCTGGATCGGCTACGA 33101 || ||| |||| | | | ||||||||| || | | |||||||| || ||||| Sbjct 43653 GATTTC-AGCCCGTTTGCGACGCGCCCGTTTGGTTATCGCGCCGTCTGGATTGGTTACGA 43711 Query 33102 CCCGTCGCATACGGGCGACAGCGC 33125 ||||||||| || ||||||||||| Sbjct 43712 CCCGTCGCACACCGGCGACAGCGC 43735 Score = 183 bits (202), Expect = 7e-42 Identities = 289/409 (71%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 34137 GAGCCGGACCTGAACCAGGAGATTTACGGGCTGCCCGAATACCTGTCGGCGCTGAACTCG 34196 |||||||| | || |||||| ||||||| ||||| |||||||| || ||||| || Sbjct 44761 GAGCCGGATATTAATCAGGAGCTTTACGGCCTGCCTGAATACCTCAGCGCCCTGAATTCT 44820 Query 34197 ACCTGGTTGAACGAGAGCGCGACGCTGTTTCGTCGGCGCTATTACAAGAACGGCAGCCAT 34256 ||||| |||| ||| || ||||| ||||||||| || || |||||||| || Sbjct 44821 GCCTGGCTGAATGAGGCTGCCACGCTCTTTCGTCGGAAGTACTATCAGAACGGCGCGCAC 44880 Query 34257 GCGGGCTTCATCCTGTACATGACCGACCCGGCCGACAAGCAG-GAGGACGTCGACAACCT 34315 || || | |||||||||||||||||| |||| | |||||| ||| |||| | | Sbjct 44881 GCCGGATATATCCTGTACATGACCGACGCGGCACA-AAGCAGCTCCGACATCGATCAGAT 44939 Query 34316 GCGCGCGGCGCTGAAGAACGCGAAGGGGCCGGGCAACTTCCGGAACCTGTTCATGTACGC 34375 ||| || || || |||| || | |||||||||||| || ||||||||||| || Sbjct 44940 GCGTAAAACGATGCGCGACACGAAAGGTCTGGGCAACTTCCGCAATCTGTTCATGTATGC 44999 Query 34376 GCCGAAGGGCAAGAAGGACGGGATCCAGCTGCTGCCGATCGGCGAGGTGGCGGCGAAGGA 34435 || || || || ||||||||| || | ||||| | | || || || |||| || Sbjct 45000 ACCCAACGGTAAACCTGACGGGATCAAGATTTTGCCGCTGAGTGAAGTCGCTACGAAAGA 45059 Query 34436 CGAGTTCTGGAACATCAAGAAGGTGACGGTCGAGGATCAGCTCGCGGCGCACCGCGTGCC 34495 ||| |||| || |||||||| | | | ||| || ||||||||||| || Sbjct 45060 CGATTTCTTCAATATCAAGAAAGCCAGCCAGAACGATTTACTGTGCGCGCACCGCGTTCC 45119 Query 34496 GCCGCAGTTGATGGGGATCATCCCGTCGAAC-GCGGGCGGGTTCGGCGA 34543 |||||| ||||||| || || ||| |||| ||||| ||||| || || Sbjct 45120 ACCGCAGATGATGGGTATTATTCCGGAGAACAGCGGG-GGGTTTGGTGA 45167 Score = 132 bits (146), Expect = 1e-26 Identities = 440/680 (65%), Gaps = 52/680 (8%) Strand=Plus/Plus Query 29872 GATGTCCTCGACCACGCAGCCCGCGCCGAATTCCTCGATCACGTACGCATCGTTCGAGCT 29931 ||||| ||||| || |||||| ||| | || || | ||| | | || || | Sbjct 40406 GATGTTCTCGATCAGGCAGCCGCCGCGATAATCTTCCACCACAAAATCTTCATTGATGGA 40465 Query 29932 TTCGAAGTTCTCGATGCGATCGCGCTTCGGG---TTGTCGATGAGCGCGCGACGGCGCGC 29988 |||| |||| ||||| || || ||||| || | ||||| | || ||| | | Sbjct 40466 TTCGTAGTTTTCGATACGGTCACGCTTTGGCACCTCTTCGATATGA---CGGCGGTGAGT 40522 Query 29989 ACCGATTTGCCAGTACAGCGACAGGTTGTCCAGGCGCGTGATCATCAGCGCGCGCGGGGG 30048 ||| |||||||| | ||||| || ||||| || |||||||| ||||| | || Sbjct 40523 GCCGTCCTGCCAGTAAATGGACAGATTATCCAGACGAGTGATCATGAGCGCATTGGCTGG 40582 Query 30049 GAAGTACGGCACGCGCACGGCCGGCAGATTGCCGATGCGCTTCTGCGCCG-TGATGACGT 30107 |||| || |||||||| ||||| | || |||||||||||||| || | | || | | Sbjct 40583 GAAGGCAGGTACGCGCACCGCCGGTAAGTTACCGATGCGCTTCTG-GCTGATAATCATAT 40641 Query 30108 CCGCGGCGAGCGCTTCGGTCGGCGGCTGATCCTTGTTCACGACCGGGAAATACTTGTCCT 30167 |||| || || ||| | | ||| |||||||||| | |||||| || |||||| Sbjct 40642 CCGCCGCAAGACTTTCAGAGTTCTCCTGCGCCTTGTTCACCAGCGGGAAGTATTTGTCCG 40701 Query 30168 GCAGCAGCTCGCGGCCGCAGATCACGACGAGATTCGGATCCTCGACGTACCACGGCTCGA 30227 |||||||| || |||||||| || || || | || || || ||| || | Sbjct 40702 CCAGCAGCTGACGCCCGCAGATAACCACCAGGCCGGTGTCGTCCTGATAAATCGGGTCAA 40761 Query 30228 GCAGTTCGTTGTTCGCGAGCGTGACGACGGCGTCAAGGTTCTTGAATTGC------TCCC 30281 || |||||| | ||| | | || | ||||| || || | | | || | Sbjct 40762 TCATGTCGTTGGTGGCGTCCATTACCAGCGCGTCCAGATTTTCATAGTCACCGTCATCAC 40821 Query 30282 CCTTGC---CGATCT------TCAC---GCC--------CGAGAAC----------ACGC 30311 | || |||| | |||| ||| | | ||| |||| Sbjct 40822 CGACGCGGACGATTTCAGAAGTCACTGTGCCATCCTCACCAATAACCTTATCCATCACGC 40881 Query 30312 GTTCCTTCGCGTTGTTGCGGTATTGCTGCAGCCAGCCGATGTTCACGTCCTGCAACAGCG 30371 ||||| ||| ||||| ||||| | |||||||||||| | |||||||||||||||| || Sbjct 40882 GTTCCGGCGCATTGTTTCGGTACTTCTGCAGCCAGCCCACATTCACGTCCTGCAACAACG 40941 Query 30372 GGTTCGCCGCGAGATC-GGTGTCGGCTGCCGCGCGC---ACGCCATTCCAGCCGATCATG 30427 ||| ||| | || | ||| |||||| ||| |||||||| |||| || || Sbjct 40942 GGTATTTAGCGCGGTCTGATGT----TGCCGCACGCTTTACGCCATTGAAGCCAATGGTG 40997 Query 30428 ATCCGATCGAGCGCCGCGCGTCGAATGATCGCGTCGCGCAGACGAGCCTGGAAGTCCGGG 30487 || ||||| |||||| ||| | ||| ||||| || | ||| |||||||||||| | Sbjct 40998 ATGCGATCCAGCGCCTGACGTTTCACGATGGCGTCACGTAAACGCGCCTGGAAGTCCTGA 41057 Query 30488 AACTTCGCCCAGGCGTCGAG 30507 | ||||||| ||||| Sbjct 41058 TAGCGCGCCCAGAGATCGAG 41077 Score = 96.9 bits (106), Expect = 8e-16 Identities = 164/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 11155 CTGCGCGCGCGAATCGTGAGCACGTCCGGCGTGCCGGTGTGCCGCACCTCGTCGACGACG 11214 ||||| ||||| || || ||| ||||||||||||| ||| |||||| || ||| Sbjct 24083 CTGCGGGCGCGGATGGTCAGCGTGTCCGGCGTGCCGCGATGCTCCACCTCATCCACGGTA 24142 Query 11215 AATTCGCCCTTGT-CGACGAGGCCGTTTGCGGCACCGGCCCAACCGATCGCCACCTTCAA 11273 || |||||||||| || | ||| || ||| ||| |||| ||| | || || Sbjct 24143 AAGTCGCCCTTGTTCGTCAGTGCC---TG----ACCTTTCCAGCCGAGCGCGATATT-AA 24194 Query 11274 TCTCA-CGCCACGGCTCGGAATCTCGAGCGCGCCGTCCGAATCGTCCAGGCTAATGTCGA 11332 || | |||| || ||| || || ||| |||||||| ||| ||| |||||||| Sbjct 24195 TCACCGCGCCGCGTGGCGGCATGTCCAGCAGGCCGTCCGTGTCGCTCAGCTCAATGTCGA 24254 Query 11333 GCTGGTCGGCTTCGAAGCCGCGGTTGTCCTGCAGCGTCATCGAGATCAACCGG 11385 ||||||| || || ||||| || || || ||||||| |||||||| |||| Sbjct 24255 GCTGGTCAGCCTCAAAGCCACGATTATCTGTGAGCGTCAGCGAGATCAGCCGG 24307 Score = 95.1 bits (104), Expect = 3e-15 Identities = 265/401 (66%), Gaps = 28/401 (7%) Strand=Plus/Plus Query 31283 CTTCGCGCTGAAG-GCGAGCATCTCCGTGCCGAGGCTCGCCGGGTTGTCGGTGACGGCGA 31341 |||||||||||| || | || || ||||| ||||| || ||| |||| || || || | Sbjct 41898 CTTCGCGCTGAATTGCAGGTAT-TCGGTGCCAAGGCTGGCGGGGCTGTCAGTCACTGCCA 41956 Query 31342 GGCCGACGAGGTACGCCTCGCCGGTGCCGGCGAAATCCGGATCGACTTCCATCGACGTGT 31401 |||||| ||||| || | |||||| ||| || || | ||||| || || |||| Sbjct 41957 GGCCGATCAGGTAGGCTTTGCCGGTATCGGAAAACGAGGGGTTAACTTCGATGGAGGTGT 42016 Query 31402 AGACCTTCTGGCGC---TGCTCGGTCGTCATCGCAATCAGGTCTTTCGTCGGCGAGAGCT 31458 | ||||||||||| | | | | | || | ||||||| |||||| || | Sbjct 42017 AAACCTTCTGGCGGGCTTTCACCATTGACA-CTAAATCAGG-----CGTCGGGTCGATAT 42070 Query 31459 GCGCGAACAACCGCATCTTTCCGTCCTGCTCTTCGGC--------CTTCAGCG------- 31503 || ||| || ||| || | | || | || | |||| ||| Sbjct 42071 CGGCATACAGTGCCAGCTTGCCTTTCAGCGCGCCGTCAGCCACTTCTTCGGCGTAAACAC 42130 Query 31504 CGATCACGTCGCCGTACGCGCGGAATGCGCCATCCGG-ATAGAGCCCGCGAATGTGTTCC 31562 || | || ||||||||| || || || | || || | | ||||| || |||| ||| Sbjct 42131 CGGTGACATCGCCGTACATACGAAACGCACTGTCAGGGAAATAGCCCTTGA-TGTGCTCC 42189 Query 31563 ATGTTGATGCGCGCGCCGTATACCGCCGGGTCGTACGTGCGCGCCATCTGTTCGAGCATC 31622 |||||||| || |||||||| ||| |||||| ||||| |||||||||||| | | Sbjct 42190 ATGTTGATACGTGCGCCGTAGACCTTCGGGTCATACGTCGCCGCCATCTGTTCAATCCAG 42249 Query 31623 GCGCGATCGATCGTGCGCCCGTCCGTTGTCGCGCCTTCGGT 31663 |||| ||| ||| ||||| || || || |||||||| Sbjct 42250 TCGCGGGTGATTTCGCGTCCGTCGGTGGTTGCCCCTTCGGT 42290 Score = 89.7 bits (98), Expect = 1e-13 Identities = 189/280 (68%), Gaps = 8/280 (3%) Strand=Plus/Plus Query 11570 GCGCGTGAGCGCGACCGTGAAATCGATGCGGCGCGCGGCGCCATCCGGGAAGAA----CA 11625 ||| || |||| | |||||| || || ||||| ||||| || | |||| || | Sbjct 24504 GCGGGTCAGCGTCAGCGTGAATTCAATCCGGCGGGCGGCACCGTT--GGAAAAATGTTCC 24561 Query 11626 GCGTGCGTGTCGTATCGATGTTGTCGATCGTGAACATGCCGTAGATGTGGCCGGTGCCCT 11685 | ||| || ||| || | ||| | | |||||| ||||| ||| |||| |||||| Sbjct 24562 GTGTGAGTTTCGCT--GACGCTGTTCACCACGAACATCCCGTATATGGTGCCGCTGCCCT 24619 Query 11686 CGATTAGCGGCCACGCGGTGTGCTGGTCCGCCATCGCCTCGAGCACCGACAGCGACAGAT 11745 | | || |||||||| || || ||| |||||| | || || ||| || || Sbjct 24620 CCAGCAGAGGCCACGCCTTGCCCTCGTCAGCCATCAGGTTCAGTGCCATCAGGGAAAGCC 24679 Query 11746 CGCCGCCGGTCAGCTCGGGCAGCAGCACGCCGGACAGCACGATCGTTTCCTCGTCCTCGC 11805 |||||||| | || |||| ||||||||||||||| || | ||||| | | ||| Sbjct 24680 GTCCGCCGGTGATTTCCGGCATCAGCACGCCGGACAGGGTAATTTTCTCCTCATTCACGC 24739 Query 11806 CGACGTACTGCCGCGCCGGCTTCCGGCCGACACGGTTGTT 11845 | | | ||||| || ||| | ||||||| ||||| || Sbjct 24740 CAAGGAACTGCGGCAGCGGACGCAGGCCGACGCGGTTATT 24779 >seq785 Length=396209 Score = 300 bits (332), Expect = 4e-77 Identities = 727/1082 (67%), Gaps = 24/1082 (2%) Strand=Plus/Plus Query 15729 GCGAACTTGACCAGATAGCGGTCGGTGATGCGCTGGCGGAACGTCAGGTCTTCGAGCGGC 15788 || || || ||||| || ||||||||| |||||||| | ||||| ||||| || || Sbjct 374875 GCAAAGTTCACCAGGTAAGAGTCGGTGATACGCTGGCGCAGGGTCAGATCTTCCAGTGGA 374934 Query 15789 GGGGCAGGGCAGAAGTCGTAATCGATGAAGCCCTGGCCGGCCTTGAGCGAATCCT-TGTC 15847 || | ||| | ||||||||||||| | | |||||| || || | ||| ||| Sbjct 374935 GGAACCGGGGTGTAGTCGTAATCGATATACAGTTTGCCGGCTTTCAGGGTTTCCGCTGT- 374993 Query 15848 GTTCGCGCCCGGATCGAACCAGCATTCGCCGTCGATCAGGTAGCCGGCGGTCTTCCACGC 15907 ||| ||| ||| ||||||| || ||||| || | ||| || || | ||| | Sbjct 374994 GTTTGCGGTTTCGTCGTACCAGCAGTCACCGTCAATGATGTAACCCGCTGATTTCATTTC 375053 Query 15908 GCGGAACTTCGCATTCACGCCATCGACGATGTCGCGCATCAGCGTGCGGCTCATCGGCTG 15967 ||| | || || || | ||| |||| |||||||| | ||| | | | |||| || | Sbjct 375054 GCGCATTTTGGCTTTGATGCCGTCGATCATGTCGCGAACCAGTGAGGGCGTCATTGGTTT 375113 Query 15968 GTCGACGGCCCACATGTGCGCCTCGGCCATCGTGTCGGCGATCACCTGCGCACTGCGCAC 16027 ||||| |||||||| ||||| || ||||| || ||||| | ||| ||||| | || Sbjct 375114 ATCGACCGCCCACATATGCGCTTCAGCCATGGTATCGGCCAGCACTTGCGCGGTACGGGT 375173 Query 16028 ATAGTTCTCGAACGCCCACAGCTTGTCCTCGGAACAGGTGCGCGATCCCCATAGACGGTA 16087 ||||| || ||| ||| | |||| ||| ||||| || ||||| | |||| | Sbjct 375174 GTAGTTTTCAAACAGGAACAACGTGTCATCGCTGCAGGTACGGTTGCCCCAGAAACGGAA 375233 Query 16088 ACCGTCCGCGTTCACCAGCGTGGTCACTTCGTGGCT--GTTCAGGTAGCCCGCGTCGGTG 16145 ||||| | ||||||||||| || | ||| |||||| | ||||| ||| Sbjct 375234 GCCGTCTTTGCGAACCAGCGTGGTGACACAG--GCTTCGTTCAGCAGATCGGCGTCAGTG 375291 Query 16146 TTCGGGTC--CTGCAGGTCCCAGAACACGTCGCGGCTGAT--GCCCGTGACGCCGTTGAC 16201 | |||| ||||| |||||||| ||| | ||||| ||| || || ||||| || Sbjct 375292 --CCGGTCGCCTGCAAATCCCAGAAGACGCTG--GCTGAAAGGCCGGTCACCCCGTTCAC 375347 Query 16202 CACGACGTTCGAGATCGTCTTGTGCCAGCCGATCTCTTCGTCGATCTTCGCGCGCATGCC 16261 ||||||| || | || || ||||||||| | || | |||||| || ||||| | ||| Sbjct 375348 GCCGACGTTTGACAGGGTTTTATGCCAGCCGGTTTCCTGGTCGATTTTGGCGCGTAAGCC 375407 Query 16262 GAGCGCGCGCGCCGTTGCCCACGTGATGTCCTCGGCGTTGGTCGTGGTGTTCCAGTTCAC 16321 || ||||| || || || | | ||| ||| | |||| | ||| |||||||| || Sbjct 375408 CAGAGCGCGAGCGGTGGCATAAGCGATATCCGACTGGCTGGTGGCGGTATTCCAGTTAAC 375467 Query 16322 GAAATCCGGCCAGATCGTCATCAGCTCACGCTGGCCGAAGTTCGCGCGGTAGGTGGTCGC 16381 || |||||||||||| |||||| || ||||| | ||||||| ||||||| | |||| Sbjct 375468 AAAGTCCGGCCAGATCAGCATCAGTTCGCGCTGACTGAAGTTCTCGCGGTATTTAATCGC 375527 Query 16382 TTCCTCCTTCGTCTGTGCGCCGAACGCGCTGATGTAGCCGAAGCCGCGCAGCTTCTGCGC 16441 || | || | |||||| | ||| || || || ||| | || |||| ||| || Sbjct 375528 ATCGGAAATGGTTTTTGCGCCATAGACGCCGACATAACCAAAGGCACGAAGCTGCTG-GC 375586 Query 16442 GATCGTC-GCAAGCTCGGACGCGACGGGCAGGGTGTCGAGGCCTGGACAACCGAGCACGC 16500 | | | || ||| ||| ||||||| | | | || || || ||| ||||| | || Sbjct 375587 AAACACCTGCCAGCGCGGTTGCGACGGCCTGATTATCCAGACCAGGAACGCCGAGAATGC 375646 Query 16501 GCGGCTTCACGCCGAG-GCGGCTCTTCGCGGCGAGCAGCGCCTTCATACCGGTGTACTGA 16559 | || || ||||| || | || || || | |||||||| ||||| ||||| || | Sbjct 375647 GTGGTTTAACGCCAAGCTCAGC-CTGAGCAGAAAGCAGCGCTTTCATGCCGGTATAACGG 375705 Query 16560 CCGTCCGCGGTGGTCGTGCCGATCACGTTGCTGGTCGTGGTATCCGGATCCTTGCCGGTC 16619 || | || | |||||| | |||||||| || | || ||| | ||| || Sbjct 375706 CCATTGGCATCAGAACCGCCGATGATATTGCTGGTGGTCTCAGCCTCATCTTCGCCCGTG 375765 Query 16620 GGCACACGCACCGCGACGATCAGCGGGGACGTCTGCGCGGCGATCGCATCGAGCG-AACG 16678 | ||||||||| |||| | | ||| ||| | || ||||| |||| || Sbjct 375766 GCAACACGCACCACGACAGTGACCGGTTTACACTGGTCAGCAATCGCCAGAAGCGCTGCG 375825 Query 16679 CGCGAGCGTGCCCTTCGTGCCTGCCTTGCCGATCGCTGCCTGCACGTCGGTGATGAGAAC 16738 ||| | |||||| | |||||||| || ||| | || ||| | || || ||||| || || Sbjct 375826 CGC-AACGTGCCGCTGGTGCCTGCTTTACCGCTGGCGGCCAGAACATCAGTGATCAGGAC 375884 Query 16739 GGGACGGTTTTC--GGGGAAGGTGGCCGCATCGGCGTCGTCGGCCGTGCTGACCAGGCCG 16796 ||| || ||| || || || |||||| || || || || || | |||| |||| Sbjct 375885 CGGA--GTATTCAAAGGAAAAACGGTCGCATCCGCATCTTCTGCGGTACAAACCATGCCG 375942 Query 16797 AT 16798 || Sbjct 375943 AT 375944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118936301488984