Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq48539 156 9e-33
seq8056 154 3e-32
seq15643 127 5e-24
seq8521 111 3e-19
>seq48539
Length=7100
Score = 156 bits (172), Expect = 9e-33
Identities = 157/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| || ||||| || ||||| ||||||||||||| || |||| || ||||| | |||
Sbjct 6462 GTGGAGGGTGGATTCCTTTTGGATATTGTAATCGGAGAGGGTTCGGCCGTCTTCCAACTG 6403
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || ||||| || || | || || |||||||| || ||||||||||||||||||||
Sbjct 6402 CTTGCCAGCGAAAATCAGCCTCTGCTGATCTGGAGGGATACCTTCTTTGTCTTGAATTTT 6343
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
| ||| ||||| ||||| || || ||| ||||| || | || | |||||| || ||
Sbjct 6342 TGCCTTCACGTTTTCAATCGTATCGGAAGGCTCCACCTCCAAAGTTATCGTCTTGCCAGT 6283
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||| ||||| ||||| | |||||
Sbjct 6282 CAAGGTTTTCACGAAAATCTGCAT 6259
Score = 143 bits (158), Expect = 6e-29
Identities = 154/204 (75%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || |||||||| |||||||| |||| ||| || | ||||| || | |||
Sbjct 6690 GTGAAGGGTAGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCCTCCAACTG 6631
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||||||||| | | || || |||||||| || ||||| |||||||| || ||
Sbjct 6630 CTTTCCTGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCTTGGATCTT 6571
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||||| || ||||| ||||| ||| || ||||| || |||| |||||||| ||
Sbjct 6570 GGCTTTGACATTTTCAATTGTGTCAGAAGGCTCAACTTCTAGAGTAATAGTCTTTCCGGT 6511
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || |||||||| | |||||
Sbjct 6510 AAGGGTCTTTACGAAGATCTGCAT 6487
Score = 118 bits (130), Expect = 2e-21
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || ||||| |||||||| ||||| || | ||| || | |||||||| | ||
Sbjct 6918 GTGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTACGTCCATCTTCCAATTG 6859
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||| ||||| | | || || ||||| ||||| ||||| ||||||||||| ||
Sbjct 6858 CTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATTCCTTCCTTGTCTTGAATCTT 6799
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || |||||||| || || ||| ||||| | ||| | || || || ||
Sbjct 6798 AGCCTTAACATTTTCAATGGTATCTGAGGGTTCAACTTCCAAGGTGATGGTTTTGCCAGT 6739
Query 195117 CAAAGTTTTTACGAACACTTGCATT 195141
| || || || || | ||||||
Sbjct 6738 AAGGGTCTTGACAAAAATCTGCATT 6714
>seq8056
Length=34938
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || || ||||| || || ||||||||||||| ||| || | |||||||| | ||
Sbjct 32105 TGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTCTAATTGT 32046
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || ||||||||||| |||||||| || |||||||| ||||||||||||||||||||
Sbjct 32045 TTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCTTGAATTTTC 31986
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| || || || || || || || || || || | || | ||||||||| |||
Sbjct 31985 GCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTCTTTCCGGTC 31926
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
|||||||| ||||| | |||||
Sbjct 31925 AAAGTTTTCACGAAAATCTGCAT 31903
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||| | ||| ||||| ||||| || || ||||| ||||| ||||| |||| || ||
Sbjct 32352 TCGGAGACGCAATACAAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAGAGGGT 32293
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| |||||||| || ||||| || | | || || ||||| || |||||
Sbjct 32292 ACGTCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATGCC 32233
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| || ||||||||||| ||||||||| ||||| || || || ||| || || ||
Sbjct 32232 TTCCTTATCTTGAATTTTGGCCTTGACGTTTTCAATAGTATCTGAGGGTTCGACCTCCAG 32173
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || || || || || ||||| | |||||
Sbjct 32172 GGTGATTGTCTTGCCAGTTAATGTCTTGACGAAGATCTGCAT 32131
Score = 86.0 bits (94), Expect = 1e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 195019 TGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTG 195078
|| || ||||| || || ||||| || |||||||| || |||||| ||||||||||||
Sbjct 32480 TGCTGATCTGGTGGGATACCTTCCTTATCTTGAATCTTAGCCTTGACATTCTCAATGGTG 32421
Query 195079 TCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGC 195138
|| || |||||||| || || | ||||| || ||||| || || ||||| | |||
Sbjct 32420 TCGGAGGGCTCCACTTCGAGAGTGATAGTCTTGCCAGTCAAGGTCTTGACGAAGATCTGC 32361
Query 195139 AT 195140
||
Sbjct 32360 AT 32359
>seq15643
Length=27379
Score = 127 bits (140), Expect = 5e-24
Identities = 162/223 (73%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||||| | || | |||||| |||||||| || || ||||||||||| | ||| ||
Sbjct 12268 TCGGAGTCGAAGCACTAAGTGAAGTGTGGACTCCTTCTGGATATTGTAATCTGAAAGGGT 12209
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| ||||| |||||||| || || |||||||| | | || || |||||||| || ||
Sbjct 12208 ACGTCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCC 12149
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
|||||||||||| || || ||||| || || || ||||| || || || |||||
Sbjct 12148 TTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAGGGCTCTACCTCAAG 12089
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| | || || || || | || || ||||| | ||||||
Sbjct 12088 GGTGATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTGCATT 12046
>seq8521
Length=40141
Score = 111 bits (122), Expect = 3e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || ||||||||||| || ||||| |||| ||| || | |||||||| | ||
Sbjct 2906 GTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGAAAGGGTACGTCCATCTTCCAATTG 2847
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||| ||||| | | || || ||||| || || ||||| || || || || ||
Sbjct 2846 CTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCCTGGATCTT 2787
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || |||||||| ||||| || || || || ||||| | ||||| || ||
Sbjct 2786 GGCTTTCACATTCTCAATTGTGTCTGAGGGCTCAACCTCTAGGGTGATGGTCTTCCCGGT 2727
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || | |||||
Sbjct 2726 CAGGGTTTTGACAAAGATCTGCAT 2703
Score = 107 bits (118), Expect = 4e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||||||||||||||| || ||||| || || || | || || | |||||||| |||||
Sbjct 2222 GTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTACGTCCATCTTCCAGCTG 2163
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | | || || ||||| || || ||||| || || || || ||
Sbjct 2162 CTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCCTGGATCTT 2103
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || |||||||| ||||| || || || || ||||| | ||||| || ||
Sbjct 2102 GGCTTTCACATTCTCAATTGTGTCAGAGGGCTCAACCTCTAGGGTGATTGTCTTGCCGGT 2043
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| | |||||
Sbjct 2042 AAGGGTCTTCACGAAAATCTGCAT 2019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1108503108651678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |