Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_015457.1 Length=165919 Score E Sequences producing significant alignments: (Bits) Value seq828 197 1e-45 >seq828 Length=218660 Score = 197 bits (218), Expect = 1e-45 Identities = 156/187 (83%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 59797 GCCATTACAGGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCA 59856 || |||||||||| ||||| || ||||| | || ||||| ||||||||||| | ||||| Sbjct 42127 GCGATTACAGGCTTTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCA 42186 Query 59857 GAGAGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCG 59916 | ||||| || || || ||||| || || ||||| || |||||||| || ||||| || | Sbjct 42187 GTGAGTTGAAACGTACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAG 42246 Query 59917 GATGCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTTACGTTCAGGTGTTGAC 59976 |||| ||||| ||||||||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct 42247 GATGTTTAACCGCATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGAC 42306 Query 59977 CACCTTC 59983 ||||||| Sbjct 42307 CACCTTC 42313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530356075396560