Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq8056 109 4e-18
seq7925 109 4e-18
seq48539 102 7e-16
seq10172 100 2e-15
seq9023 95.1 1e-13
seq15643 93.3 3e-13
seq10259 91.5 1e-12
seq8521 86.0 5e-11
>seq8056
Length=34938
Score = 109 bits (120), Expect = 4e-18
Identities = 158/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||||||| || | ||| ||||| ||| | ||| ||||||||||| | || ||
Sbjct 32121 GAGACGGAGCACCAAATGGAGGGTCGACTCCTTCTGG--ATATTGTAATCGGAAAGGGTG 32064
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| |||||| | ||||||||| || || ||||| | ||| ||||| ||||||||||||
Sbjct 32063 CGACCATCTTCTAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGAATTCCT 32004
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433
||||| ||||||||||| ||||| || || ||||| | | | | || |
Sbjct 32003 TCTTTGTCTTGAATTTTCGCCTTTACATTTTCGATCGTATCTGAGGGCTCAACCTCCAAT 31944
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || || || | |||||| |||||||| |||||
Sbjct 31943 GTGATCGTCTTTCCGGTCAAAGTTTTCACGAAAATCTGCAT 31903
Score = 100 bits (110), Expect = 2e-15
Identities = 156/221 (71%), Gaps = 4/221 (2%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
|||||| | |||||||||||||||| |||||| ||| ||||| || | || || |
Sbjct 32349 GAGACGCAATACAAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAGAGGGTACG 32290
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
| |||||| || || || || || ||||| | || |||||||| || || || |||||
Sbjct 32289 TCCATCTTCCAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATGCCTTC 32230
Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTAC--ATTCGAGA 563433
|||||||||||||| || || ||||| ||||| || | || | || ||
Sbjct 32229 CTTATCTTGAATTTTGGCCTTGACGTTTTCAATAGTATC--TGAGGGTTCGACCTCCAGG 32172
Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | || || ||||| | || || ||||| || |||||
Sbjct 32171 GTGATTGTCTTGCCAGTTAATGTCTTGACGAAGATCTGCAT 32131
>seq7925
Length=34777
Score = 109 bits (120), Expect = 4e-18
Identities = 190/277 (69%), Gaps = 12/277 (4%)
Strand=Plus/Plus
Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852
||| || || |||||||| || || |||||||||||||| | || |||||||| ||
Sbjct 20404 AGTGTTTGACTGCTGGTTCGAGTCCGGTTCTATGCCTTACGCCCAGCAGCATTATCCGTT 20463
Query 368853 TGATAACGCAAAATACTTTGATAATGATAAAGATTATGT---GGCTGATTTTGTAACAGA 368909
||| || | || | ||||| |||| | | ||||||||| | | ||
Sbjct 20464 TGAGAATGTGAAGGAGTTTGAG---------GATTGTTTCCCGGCTGATTTCATTGCCGA 20514
Query 368910 ATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTT 368969
||||||||||| | |||||||| || || | || || | |||||| | | ||
Sbjct 20515 GGGTATTGATCAAACGAGGGGTTGGTTCTACACTTTGTTGGTTATCTCCACATCATTGTT 20574
Query 368970 CGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCA 369029
| | ||||| |||| || ||| | || | | ||| | ||| ||||||||||||||
Sbjct 20575 CAACAAACCTCCTTTCAAGAATCTTATTGCTAATGGATTGGTTCTGGCATCTGATGGTCA 20634
Query 369030 AAAGATGTCAAAAAGTAAGGGTAATTATTCCGATCCT 369066
||||||||||| || ||| |||||| | ||||||
Sbjct 20635 GAAGATGTCAAAGAGAAAGAAGAATTATCCAGATCCT 20671
>seq48539
Length=7100
Score = 102 bits (112), Expect = 7e-16
Identities = 158/222 (71%), Gaps = 8/222 (4%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| || | |||||||| ||| |||| ||| ||||| || | || || |
Sbjct 6932 AGACGGAGGACCAAGTGAAGGGTTGACTCCTTTTG--AATGTTGTAGTCCGAAAGGGTAC 6875
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
| |||||| | ||| ||||| ||||| || | || |||||||| || ||||||||||
Sbjct 6874 GTCCATCTTCCAATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGAATTCCTT 6815
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA--TTCGAG 563432
| || |||||||| || || || ||||| ||||| || | || || ||| |
Sbjct 6814 CCTTGTCTTGAATCTTAGCCTTAACATTTTCAATGGTATC--TGAGGGTTCAACTTCCAA 6757
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|| | ||||| |||||||| || || || ||||| |||||
Sbjct 6756 GGTGATGGTTTTGCCAGTAAGGGTCTTGACAAAAATCTGCAT 6715
Score = 96.9 bits (106), Expect = 3e-14
Identities = 115/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378
|||||||||||| || || ||||| || | || |||||||| || ||||| ||||| ||
Sbjct 7098 ATCTTCAAGTTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTT 7039
Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAAC 563438
||||| || || ||| || ||||| ||||| | | | | ||||| || |
Sbjct 7038 GTCTTGGATCTTGGCTTTAACATTTTCAATGGTATCTGAGGGCTCAACCTCGAGTGTTAT 6979
Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||||||||||| ||||| || ||||| ||||||||
Sbjct 6978 GGTTTTACCAGTCAGAGTCTTGACGAAGATTTGCAT 6943
Score = 95.1 bits (104), Expect = 1e-13
Identities = 157/222 (71%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313
||||||||| || | || ||||| ||| ||||| ||||||||||| | || |||
Sbjct 6477 GAGACGGAGCACCAAGTGGAGGGTGGATTCCTTTTGG--ATATTGTAATCGGAGAGGGTT 6420
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| ||||| | || || || || ||||| || || |||||||| ||||| || |||
Sbjct 6419 CGGCCGTCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCTGGAGGGATACCT 6360
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAG 563432
||||| |||||||||||| || || ||||| ||||| | | | || || |
Sbjct 6359 TCTTTGTCTTGAATTTTTGCCTTCACGTTTTCAATCGTATC-GGAAGGCTCCACCTCCAA 6301
Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
||| | || || ||||| | ||||| |||||||| |||||
Sbjct 6300 AGTTATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 6259
>seq10172
Length=59204
Score = 100 bits (110), Expect = 2e-15
Identities = 245/367 (67%), Gaps = 6/367 (2%)
Strand=Plus/Plus
Query 550178 TTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATG 550237
|| ||| ||| || | |||||| | | || ||||| | ||| ||||||||||||
Sbjct 47697 TTAGATATTAAGCGGCTGATTGGACGCAAATTCGATGATCATAATGTCCAGGCAGATATG 47756
Query 550238 AAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTCAT 550297
| ||||||||||| | |||| |||| | | ||| | ||| ||| ||| |||
Sbjct 47757 CAACATTGGCCTTTTGATGTTGTGAATGATAACTTATCACCAAAGATTAAAGTTACACAT 47816
Query 550298 GAAGGATCTGTTAAACAATTTTCA--CCAGAACAAATTTCATCTATGGTTTTAATGAAAA 550355
||||| | || ||| || || ||| |||| | ||| || | | |||
Sbjct 47817 AAAGGAAGAGAGAAG--ATTGTCTGCCCCGAAGAAATAAGCGCCATGATTCTGACGAATT 47874
Query 550356 TGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGTAATAACTGTA 550414
|||| | || || || | | | | | | | ||| |||||||| || || || |||
Sbjct 47875 TGAAGGAGACGGC-AGAGATGTACCTCGGAATGCCAGTCACGGATGCTGTCATCACCGTA 47933
Query 550415 CCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGA 550474
|| || || || || || || || | || |||| |||||||| |||||| ||
Sbjct 47934 CCTGCCTACTTCAACGATTCCCAGAGATTGGCCACTATTGATGCTGGTAATATTGCGGGG 47993
Query 550475 CTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTTGAT 550534
|||||||||||||| ||||| || || ||||| || || || |||| |||||||| ||
Sbjct 47994 CTTAATGTTCTTCGAATTATTAACGAGCCTACCGCAGCCGCTATTGCTTATGGACTAGAG 48053
Query 550535 AAACATA 550541
||| |||
Sbjct 48054 AAATATA 48060
>seq9023
Length=34353
Score = 95.1 bits (104), Expect = 1e-13
Identities = 219/325 (67%), Gaps = 4/325 (1%)
Strand=Plus/Plus
Query 550222 TGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA 550281
||| ||||||||||| | ||||||||||| | |||| |||| | || ||| |
Sbjct 8854 TGTCCAGGCAGATATTCAACATTGGCCTTTTGATGTTGTGAATGATAACTCAACACCAAA 8913
Query 550282 TATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCA-GAACAAATTTCATCTA 550340
||| ||| ||| | ||||| | ||| | ||| |||| ||| |||| | |
Sbjct 8914 CATTAAAGTTACGTACAAAGGAAGCGAGAAA-ATTTTCCACCCCGAAGAAATAAGCGCCA 8972
Query 550341 TGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGAT 550399
|| || ||| ||| |||||| | || || || || | || | || || | ||||
Sbjct 8973 TGATTCTAACGAATATGAAAAAGACGGCAGAGGCATTCCTCGGA-ATGACTGTCAAGGAT 9031
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| || || || || || || || || ||||| | || | || || | |||||
Sbjct 9032 GCTGTCATCACCGTGCCTGCCTACTTCAATGAACCCCAGAGATTGGCCACCATTGATGCG 9091
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
||| | |||| || |||||||| ||||| ||||| || || || || || ||||| ||
Sbjct 9092 GGAACTGTTGCGGGGCTTAATGTCCTTCGCATTATTAACGAGCCCACCGCAGCTGCTATT 9151
Query 550520 GCATATGGACTTGATAAACATAATG 550544
|| ||||||||||| ||| ||| ||
Sbjct 9152 GCTTATGGACTTGAGAAAAATATTG 9176
>seq15643
Length=27379
Score = 93.3 bits (102), Expect = 3e-13
Identities = 132/183 (72%), Gaps = 2/183 (1%)
Strand=Plus/Minus
Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352
||||||||||| | || || | | ||| || || ||||||||||| || || | ||
Sbjct 12228 ATATTGTAATCTGAAAGGGTACGTCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTC 12169
Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412
|||||||| ||||| ||||||||||| ||||| || || ||| || || || ||
Sbjct 12168 TGCTGATCTGGAGGGATTCCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTG 12109
Query 563413 TCAGTGTG-AGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471
|||| | | ||| || || || | ||||| || ||||| || || |||||||| ||
Sbjct 12108 TCAGAGGGCTCTAC-CTCAAGGGTGATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTG 12050
Query 563472 CAT 563474
|||
Sbjct 12049 CAT 12047
>seq10259
Length=36189
Score = 91.5 bits (100), Expect = 1e-12
Identities = 281/432 (65%), Gaps = 2/432 (0%)
Strand=Plus/Minus
Query 551904 CGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACT 551963
||| |||| | |||| |||||||| || | |||||||||| || | | ||
Sbjct 4630 CGTTTAAGGGCATCTTGTGAAAGAGCAAAGAGGAATCTTTCATCTTATAACAACGCTACC 4571
Query 551964 ATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAA 552023
|| ||| ||||||| ||||| ||||| || |||| | | |||| |||| |||
Sbjct 4570 ATCGAAATAGATTCCTTATTCGAGGGCATCGATTTTCGTGATTCTATAACGAGAGCCGGT 4511
Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTA 552083
|| ||||| | ||| ||||| |||||| ||||| ||||| ||| | | | |||
Sbjct 4510 TTCGAAGAATTAAATTCCGATCTGTTTAGATCCACAATGGAACCTGTAAAGAAGGCATTA 4451
Query 552084 AGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACA 552143
| ||| | || || | ||| | | | || || ||||| || || || ||||| |
Sbjct 4450 AATGATGCCAATATGAACAAAGACCAGCTGCACGATATTGTCCTCGTCGGAGGATCCTCC 4391
Query 552144 AGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAA 552203
| |||||| |||| | | | | | ||||||||||| ||| | | ||| ||
Sbjct 4390 CGCATTCCTCAAATCCAGAAGCTTCTCCGAGACTATTTCAATGGCAAAGAGCTGAAT-AA 4332
Query 552204 AGTGTT-AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262
| ||| |||| || |||||| | || ||||| || || | ||||| ||| |||
Sbjct 4331 ATCGTTGCATCCTGAAGAGGCTATAGCTTATGGCGCAGCGGTGCAAGCTGCTCACCTTCA 4272
Query 552263 TGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322
||| | | | || || | | || | | ||| | || || ||||| || ||||
Sbjct 4271 AGGAGACATGTCTAAAGAATTGAAGAAACTACTTCTTCTGGAAGTCACTCCCCTGACTCT 4212
Query 552323 TGGTTTAGAAAC 552334
|||||||||||
Sbjct 4211 GGGTTTAGAAAC 4200
>seq8521
Length=40141
Score = 86.0 bits (94), Expect = 5e-11
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315
||||||||| || | ||||||||| ||| || ||| ||||| |||| || || |
Sbjct 2009 GAGACGGAGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTACG 1950
Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375
|||||||||||| || || ||||| || | || |||||||| || ||||| |||||
Sbjct 1949 ACCATCTTCAAGTTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTC 1890
Query 563376 TTTATCTTGAATTTT 563390
|| ||||| || ||
Sbjct 1889 CTTGTCTTGGATCTT 1875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4025655747638660
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