Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_016571.1 Length=284757 Score E Sequences producing significant alignments: (Bits) Value seq9405 159 6e-34 seq785 89.7 9e-13 seq725 87.8 3e-12 >seq9405 Length=40329 Score = 159 bits (176), Expect = 6e-34 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 208704 AGTGTCTGATATTTCAGGTTACTGATGAACAGGTGTTTCTCGTGATCTGGTAAAGCCATG 208763 || ||||| |||||||| || || | ||| | |||||| |||||||| || || ||| Sbjct 35881 AGCGTCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCAACGCCTGA 35822 Query 208764 TAGTCAATACGGTCACGGGAGACATCTACTTCTTCAGGACGCCAGAAGAAAGAAAGTTGT 208823 | || |||||||| ||||| ||||| | ||||| |||||||||||||| || || || Sbjct 35821 AAATCGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGC 35762 Query 208824 TTCTCAATGAGTTTCTCAAAGATCTCATACTTCTGTTGGTCGTAACGAGAAACGTTGACG 208883 || || || ||||| |||||||| |||| |||||| |||||| |||| | |||||| || Sbjct 35761 TTTTCGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACC 35702 Query 208884 TTTTGACCCAGGAACATGTGTTCTTGTAATTGATCGTTTTTGTTTTGGTTGAAAGT 208939 || || | |||||| | || | | ||||||||||| || ||| ||||| Sbjct 35701 GACTGGCCAAAGAACATTGGCTCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGT 35646 >seq785 Length=396209 Score = 89.7 bits (98), Expect = 9e-13 Identities = 71/84 (85%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 16034 AAATTATGGTGGCCCCGGCGTGACTTGAACACGCGACCAAGCGATTATGAGTCACCTGCT 16093 ||||| ||||||||| || ||||||||| ||||||||||||||||||||| | |||| Sbjct 187890 AAATT-TGGTGGCCCTTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGTGCT 187948 Query 16094 CTAACCGTCTGAGCTACGGGGCCG 16117 |||||| |||||||| |||||| Sbjct 187949 CTAACCAACTGAGCTAAAGGGCCG 187972 >seq725 Length=236385 Score = 87.8 bits (96), Expect = 3e-12 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 16118 GAATGGCGCGCCCTACAGGATTCGAACCTGTGACCAATAGCTTAGAAGGCTACTGCTCTA 16177 |||||| ||||||||||| |||||||||||||| | ||||||||||| ||||||| Sbjct 175434 GAATGGTACGCCCTACAGGGCTCGAACCTGTGACCTACGGCTTAGAAGGCCGTTGCTCTA 175375 Query 16178 TCC-ACTGAGCTAAGAGCGC 16196 ||| ||||||||||| |||| Sbjct 175374 TCCAACTGAGCTAAGGGCGC 175355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910310471600880