Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq828 114 9e-21 >seq828 Length=218660 Score = 114 bits (126), Expect = 9e-21 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 27066 AGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGAGTCAGTGCATTAAATCGAAC 27125 ||| || ||||| |||| ||||| ||| |||||| |||||||| || || || || Sbjct 42143 AGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACGTAC 42202 Query 27126 AGCGTAGCCAGAGACACGGATGGTCAACTGAGGATATTTTTCAGGATGTTTCTGCGCATC 27185 || |||||||| ||||| || |||| ||| || ||||| ||||||||||| |||||| Sbjct 42203 CGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGCATC 42262 Query 27186 CAAAAGCTGGTCACGGCTTAATACATTAACATTTAGGTGCTGACCACCTTC 27236 || ||||| | | ||| ||||| || ||||||||||||||||| Sbjct 42263 TTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTC 42313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347912685987836