Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_017974.1
Length=149273
Score E
Sequences producing significant alignments: (Bits) Value
seq9405 156 4e-33
>seq9405
Length=40329
Score = 156 bits (172), Expect = 4e-33
Identities = 183/245 (75%), Gaps = 2/245 (1%)
Strand=Plus/Minus
Query 118296 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAG- 118354
||||||| ||||| ||||| | ||||||||| || ||||||||||||| | | || |
Sbjct 35877 TCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCA-ACGCCTGAAAA 35819
Query 118355 TCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTC 118414
||||||||||| |||| || | || |||||||||||||||||||| | ||| |||||
Sbjct 35818 TCGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGCTTT 35759
Query 118415 TCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTC 118474
|||||||| || || || | | || ||||||||||| | || | |||||| | |
Sbjct 35758 TCGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACCGAC 35699
Query 118475 TCGCCGAGGAACATCGGCTGAGTCAGGAAATCGAATTTGTTCTGGTTGAAAGTGCTGTAA 118534
| ||| | |||||| |||| | || |||| ||| |||||| ||||| ||||||
Sbjct 35698 TGGCCAAAGAACATTGGCTCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGTACTGTAA 35639
Query 118535 GACAT 118539
| |||
Sbjct 35638 GCCAT 35634
Score = 86.0 bits (94), Expect = 6e-12
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Minus
Query 119159 CGAGGTGGCTCAAAACCATTCGTGGAGTTAGTGATCTGGCTGGATGTCTCGCAAGGCATC 119218
|| |||||||| | ||| || || | ||| | |||||| || |||||| | ||||||
Sbjct 35194 CGCGGTGGCTCGATACCGTTGGTAGCGTTGGAGATCTGCGAAGAGGTCTCGGACGGCATC 35135
Query 119219 ATCGTGGACAGCGTGGAGTTACGCAGGCCATGAATCGCGATATCGACACGCAGCTTTTCC 119278
| || ||||||||||||||||||||||| || | ||| |||||||| | |||
Sbjct 35134 AGCGCAGACAGCGTGGAGTTACGCAGGCCGTGCGTTTTGATGCTTTCACGCAGCGTATCC 35075
Query 119279 CAGTCCA 119285
|||||||
Sbjct 35074 CAGTCCA 35068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477134707827120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |