Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_017974.1 Length=149273 Score E Sequences producing significant alignments: (Bits) Value seq9405 156 4e-33 >seq9405 Length=40329 Score = 156 bits (172), Expect = 4e-33 Identities = 183/245 (75%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 118296 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAG- 118354 ||||||| ||||| ||||| | ||||||||| || ||||||||||||| | | || | Sbjct 35877 TCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCA-ACGCCTGAAAA 35819 Query 118355 TCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTC 118414 ||||||||||| |||| || | || |||||||||||||||||||| | ||| ||||| Sbjct 35818 TCGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGCTTT 35759 Query 118415 TCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTC 118474 |||||||| || || || | | || ||||||||||| | || | |||||| | | Sbjct 35758 TCGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACCGAC 35699 Query 118475 TCGCCGAGGAACATCGGCTGAGTCAGGAAATCGAATTTGTTCTGGTTGAAAGTGCTGTAA 118534 | ||| | |||||| |||| | || |||| ||| |||||| ||||| |||||| Sbjct 35698 TGGCCAAAGAACATTGGCTCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGTACTGTAA 35639 Query 118535 GACAT 118539 | ||| Sbjct 35638 GCCAT 35634 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 119159 CGAGGTGGCTCAAAACCATTCGTGGAGTTAGTGATCTGGCTGGATGTCTCGCAAGGCATC 119218 || |||||||| | ||| || || | ||| | |||||| || |||||| | |||||| Sbjct 35194 CGCGGTGGCTCGATACCGTTGGTAGCGTTGGAGATCTGCGAAGAGGTCTCGGACGGCATC 35135 Query 119219 ATCGTGGACAGCGTGGAGTTACGCAGGCCATGAATCGCGATATCGACACGCAGCTTTTCC 119278 | || ||||||||||||||||||||||| || | ||| |||||||| | ||| Sbjct 35134 AGCGCAGACAGCGTGGAGTTACGCAGGCCGTGCGTTTTGATGCTTTCACGCAGCGTATCC 35075 Query 119279 CAGTCCA 119285 ||||||| Sbjct 35074 CAGTCCA 35068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477134707827120