Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq223 237 5e-58 >seq223 Length=511576 Score = 237 bits (262), Expect = 5e-58 Identities = 251/330 (76%), Gaps = 3/330 (1%) Strand=Plus/Plus Query 25944 GCCGATCATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAAC 26003 ||||| |||||||||||| ||||| ||||| || || | ||| |||||||| ||||| Sbjct 459546 GCCGAGCATCTGCATGGTGCCGCCCACGTTAACGACGACTTCGGTGGTGTATTTTTCAAC 459605 Query 26004 GCCGTCCTTTTC---CCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACC 26060 ||| ||| || ||| || ||||||| |||| || || ||||| ||||| ||||| Sbjct 459606 GCCAGCCTGATCGGTCCATTTACGGGTTTGCAGTGCGCCTTCGATGTAGACCTGAGAACC 459665 Query 26061 TTTCTTCAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCA 26120 |||||||||||| ||||| |||| || |||| ||||| |||| ||| || || ||||| Sbjct 459666 TTTCTTCAGGTATTCGCCTGCGACTTCTGCTAATTTGCCGAACAACACCACACGGTGCCA 459725 Query 26121 TTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTAC 26180 ||| || |||||||| |||||||| || || |||||| || || || || | Sbjct 459726 TTCCGTTTTTTCTTTCTGCTCGCCGGTGGCTTTGTCACGCCAGCTCTCAGACGTTGCCAG 459785 Query 26181 GGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAG 26240 || |||||||| || |||||||| ||||||||||| |||| || || || | ||||| Sbjct 459786 AGTGATGTTGGCAACCGCGCCGCCGTTAGGCATGTAGCGGACTTCCGGGTCTTGTCCCAG 459845 Query 26241 GTTACCGACAAGGATTACTTTATTTACGCC 26270 |||||||| || || ||||| |||||||| Sbjct 459846 ATTACCGACGAGAATAACTTTGTTTACGCC 459875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159686964494444