Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_017981.1
Length=49981
Score E
Sequences producing significant alignments: (Bits) Value
seq223 237 5e-58
>seq223
Length=511576
Score = 237 bits (262), Expect = 5e-58
Identities = 251/330 (76%), Gaps = 3/330 (1%)
Strand=Plus/Plus
Query 25944 GCCGATCATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAAC 26003
||||| |||||||||||| ||||| ||||| || || | ||| |||||||| |||||
Sbjct 459546 GCCGAGCATCTGCATGGTGCCGCCCACGTTAACGACGACTTCGGTGGTGTATTTTTCAAC 459605
Query 26004 GCCGTCCTTTTC---CCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACC 26060
||| ||| || ||| || ||||||| |||| || || ||||| ||||| |||||
Sbjct 459606 GCCAGCCTGATCGGTCCATTTACGGGTTTGCAGTGCGCCTTCGATGTAGACCTGAGAACC 459665
Query 26061 TTTCTTCAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCA 26120
|||||||||||| ||||| |||| || |||| ||||| |||| ||| || || |||||
Sbjct 459666 TTTCTTCAGGTATTCGCCTGCGACTTCTGCTAATTTGCCGAACAACACCACACGGTGCCA 459725
Query 26121 TTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTAC 26180
||| || |||||||| |||||||| || || |||||| || || || || |
Sbjct 459726 TTCCGTTTTTTCTTTCTGCTCGCCGGTGGCTTTGTCACGCCAGCTCTCAGACGTTGCCAG 459785
Query 26181 GGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAG 26240
|| |||||||| || |||||||| ||||||||||| |||| || || || | |||||
Sbjct 459786 AGTGATGTTGGCAACCGCGCCGCCGTTAGGCATGTAGCGGACTTCCGGGTCTTGTCCCAG 459845
Query 26241 GTTACCGACAAGGATTACTTTATTTACGCC 26270
|||||||| || || ||||| ||||||||
Sbjct 459846 ATTACCGACGAGAATAACTTTGTTTACGCC 459875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159686964494444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |