Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_018275.1
Length=39783
Score E
Sequences producing significant alignments: (Bits) Value
seq725 279 1e-70
>seq725
Length=236385
Score = 279 bits (308), Expect = 1e-70
Identities = 556/819 (68%), Gaps = 26/819 (3%)
Strand=Plus/Plus
Query 31811 CGTCTGAGGAACGGAGAAGAGTCGGATACCCTGAAGACCGGAATCGAAGAGCTTGACGCT 31870
||||| | ||||| || |||||||| || || || ||||| || ||||| ||||
Sbjct 188784 CGTCTTAAAAACGGTGAGGAGTCGGACACGCTTAAAACCGGCATACCTGAGCTGGACGAA 188843
Query 31871 ATCACCGGAGGGATGAACGCAGAAGACCTTGTGATTATTGCTGCTCGTCCTGGTATGGGT 31930
|| || || || ||||| || || || | || | |||||||| |||||||||||
Sbjct 188844 ATTACAGGCGGACTGAACAACGAGGATCTGATCATCGTAGCTGCTCGCCCTGGTATGGGG 188903
Query 31931 AAAACCGAACTGGCGCTAAAGATAGCCGAAGGCGTGGCAAGTCGTGTTATTCCTGGTTC- 31989
|||||||| | || || | | || ||||| || || || ||||| || ||
Sbjct 188904 AAAACCGAGTTTGCTCTGACCGTGGCTGAAGGTGTTGCGGAAAGTACTATTC--GGATCG 188961
Query 31990 -CGACG------TCCGGCGCGGTGTGTTGATTTTCTCGATGGAAATGAGCGCCATTCAGG 32042
||| | | | |||||| ||| |||||||| |||||||||||||| ||||
Sbjct 188962 GCGATGAGGTGTTGCCGCGCGGCGTGCTGATTTTCAGCATGGAAATGAGCGCTCAGCAGG 189021
Query 32043 TTGTTGAGAGAGGGATTGCCGGCGCAGGAATGATGTCGGTGAGTGTGCTGCGTAACCCAT 32102
| | || | | | || ||||| || ||| ||||| || ||||| || || |
Sbjct 189022 TCATAGAACGCCAGTTGGCTGGCGCCTCAAACATGCCGGTGTCTGCCCTGCGCAAACCTT 189081
Query 32103 CACGTATGGACGATGAAGGATGGGCGAGAGTTGCAAGTGGGATGAAG----TTGCTGGCA 32158
|||||||| ||||||||| ||||| | | | | || || ||| | |||||
Sbjct 189082 CACGTATGAACGATGAAGACTGGGCACGCATATCGATGGGCATTAAGCGTTTATCTGGC- 189140
Query 32159 GATCTAGATGTGTGGGTAGTTGACGCGTCACGTTTGTCTGTCGAAGAAATCAGGTCCATC 32218
|| | |||||||| || || ||||| || | | || | ||| | | ||
Sbjct 189141 ---CTGCAGGTGTGGGTTGTCGATGCGTCGAAACTGACCATTGAGCAGATCCGCGCGATT 189197
Query 32219 GCCGAACGCCACAAGCAGGAGCACCCGAATCTGTCACTGATTATGGCTGACTATCTCGGG 32278
|| ||| | ||||| | | | |||| ||||| || || || || || || || ||
Sbjct 189198 GCGGAAAGGCACAAACGGAAATACCCAAATCTATCTCTCATCCTGTGCGATTACCTTGGC 189257
Query 32279 CTAATTGAGAAACCAAAAGCGGAACGTAATGACCTCGCAATTGCTCACATCTCCGGTAGC 32338
|| || || || || || ||||| || ||||| || || || ||||||||||| ||
Sbjct 189258 CTGATCGAAAAGCCGCGTGCTGAACGAAACGACCTGGCGATCGCCCACATCTCCGGCGGC 189317
Query 32339 CTGAAAGCGATGGCGAAAGACCTGAAAACTCCTGTTATCTCCCTAAGCCAGCTCTCCCGC 32398
||||| |||||||| |||||||| || || || || || || || ||||| ||||||
Sbjct 189318 ATGAAACGCATGGCGAAGGACCTGAAGACGCCAGTGATGTCACTTAGTCAGCTGTCCCGC 189377
Query 32399 GATGTTGAGAAGCGACCAA------ACAAACGCCCGACAAACGCAGATTTGCGTGATTCA 32452
|| || ||||||||||||| | ||||| ||| ||| | || |||| ||
Sbjct 189378 GACGTGGAGAAGCGACCAAAGGGCCAGAAACGGCCGGTTAACTCTGACCTGCGCGACGGG 189437
Query 32453 GGAAGCATTGAACAGGATGCAGACTCAATCATCATGCTCTATCGGGAAGCGGTATATG-A 32511
|| ||||| || ||||| || ||| || ||||| || || |||| ||| |||| |
Sbjct 189438 GGGAGCATCGAGCAGGACGCCGACGGGATTTATATGCTGTACCGCGAAGGGGTGTATGAA 189497
Query 32512 CGAGAACAGTAGCGCCGCACCATTTGCTGAAATCATCGTGACGAAAAACCGTTTTGGCTC 32571
| ||| || ||||| || || ||||||||||||||||| || ||||| |||||
Sbjct 189498 CCCGAA-AGCCCTGCCGCGCCGTTCGCTGAAATCATCGTGACCAAGAACCGATTTGGTGA 189556
Query 32572 GCTTGGTACGGTTTACCAGCGGTTCTGCAACGGACACTT 32610
||| ||||| |||||||||| |||| ||||| |||||
Sbjct 189557 GCTCGGTACCGTTTACCAGCAGTTCAAAAACGGGCACTT 189595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127080039321460
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |