Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq223 104 9e-18 >seq223 Length=511576 Score = 104 bits (114), Expect = 9e-18 Identities = 224/334 (67%), Gaps = 11/334 (3%) Strand=Plus/Minus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 10031 ||| |||||||| || |||||||| ||||| || ||||||||| ||||||| | || Sbjct 459873 CGTAAACAAAGTTATTCTCGTCGGTAATCTGGGACAAGACCCGGAAGTCCGCTACATGCC 459814 Query 10032 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGC 10091 | ||||| ||| | |||||||| || || ||| | || ||| ||||| || Sbjct 459813 TAACGGCGGCGCGGTTGCCAACATCACTCTGGCAACGTCTGAGAGCTGGCGTGACAAAGC 459754 Query 10092 GAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGC 10151 | ||||||| ||| ||| || ||||||||||| || || |||||| | || Sbjct 459753 CACCGGCGAGCAGAAAGAAAAAACGGAATGGCACCGTGTGGTGTTGTTCGGCAAATTAGC 459694 Query 10152 CGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCA-TCC 10210 || ||| | ||| |||||| || || | | |||||||||||| || |||| | | Sbjct 459693 AGAAGTCGCAGGCGAATACCTGAAGAAAGGTTCTCAGGTCTACATCGAAGG-CGCACTGC 459635 Query 10211 GCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGTC---- 10266 || || || ||| ||| | || ||| || ||||| ||||| ||||| Sbjct 459634 AAACCCGTAAATGGACCGATCAGGCTGGCGTTGAAAAATACACCACCGAAGTCGTCGTTA 459575 Query 10267 -----GCCGAGAAGATGCAGATGCTCGGCGACCG 10295 | || | |||||||||||||||| ||| Sbjct 459574 ACGTGGGCGGCACCATGCAGATGCTCGGCGGCCG 459541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197627126693172