Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_018846.1 Length=60894 Score E Sequences producing significant alignments: (Bits) Value seq725 136 2e-27 seq785 114 5e-21 >seq725 Length=236385 Score = 136 bits (150), Expect = 2e-27 Identities = 336/502 (67%), Gaps = 22/502 (4%) Strand=Plus/Plus Query 28527 GCTGCCGTTCTGGCGCTG--ATTGCCGCAGGTGCTTCTGCGCCTGAAATCCTCGACCAGT 28584 || || || ||||||||| |||| | || || ||||| || | || ||||| || | Sbjct 192983 GCCGCTGTGCTGGCGCTGGTATTG--GGTGGCGCATCTGCCCCGGCTATTCTCGATCAAT 193040 Query 28585 TTCTGGATGAAAAGGAAGGCAACCACACCACGGCATACCGTGATGGTGTGGGTATCTGGA 28644 | |||||||| || ||||| ||| | || || || | |||||| || | |||| Sbjct 193041 TGCTGGATGAGAAAGAAGGTAACAGCCTGACTGCCTATCAAGATGGTACCGGCCTTTGGA 193100 Query 28645 CCATCTGCCGTGGTGCCACCCAGGTGGATGGTAAGCTTGTCGTCCCCGGCATGAAGTTGT 28704 | || |||||||| || | || || || ||||||| ||| || |||| | || Sbjct 193101 CGATTTGCCGTGGCGCAATCCGTGTCGACGGTAAGCCGGTCTATAAAGGTATGAGGCTGA 193160 Query 28705 CGAAGGAAAAATGCGACCAGGTTAA-CGCCATTGAACGTGATAAGGCGCTGGCATGGGTG 28763 | | || |||| ||||| || || | | || | |||||| | || |||||| Sbjct 193161 CCGCTGCGAAGTGCGCGCAGGTGAATCGGC-TGGAGTCAAACAAGGCGATTGCCTGGGTG 193219 Query 28764 GCGAAAAACATCAGAGTGCCACTGACCGAACCTCAGAAAGCGGGGATCGCGTCATTCTGT 28823 | ||||| ||| || ||||| || | ||||||| || || ||||| || ||||| Sbjct 193220 AAGGAAAACGTCAACGTTCCACTTACGCAGCCTCAGATTGCTGGCATCGCCTCGTTCTGC 193279 Query 28824 CCTTACAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAA---TTAAT 28880 || |||||||| |||||| || ||||| | || || || || |||| | || Sbjct 193280 CCCTACAACATCGGCCCCTCGAAATGTTTTTCATCCACTTTCTAC---CGAAAGCTCAAC 193336 Query 28881 GCAGGCGATCGCAGGGGAGCGTGTGAAGCGATT-----CGCTGGTGGATTAAGGACGGTG 28935 || |||||| || | ||| ||| ||||| |||||| | | ||||||| Sbjct 193337 GCTGGCGATA--AGCGCGGCGCGTGCAGCGAGATAAAGCGCTGGGTGCGT---GACGGTG 193391 Query 28936 GCAGAGACTGCCGTATCCGCTCAAATAATTGCTACGGTCAGGTATCCCGTCGCGACCAGG 28995 | | ||||||| | |||| ||||||||||| || ||||| || ||||| |||| Sbjct 193392 GTAAAGACTGCAATGTCCGGGCAAATAATTGCCTTGGGCAGGTGATACGCCGCGATCAGG 193451 Query 28996 AGAGTGCGCTGGCATGCTGGGG 29017 | || | |||| | |||||||| Sbjct 193452 AAAGCGAGCTGACGTGCTGGGG 193473 >seq785 Length=396209 Score = 114 bits (126), Expect = 5e-21 Identities = 89/102 (87%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 23571 TACCGTTATTATCCTGCGCC-CGGCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATA 23628 |||||| || |||| || || ||||||||||||||||| ||| ||||| |||||||||| Sbjct 187992 TACCGT-ATAATCCCGCACCTCGGCCCTTTAGCTCAGTTGGTTAGAGCACGCGACTCATA 187934 Query 23629 ATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCATAT 23670 ||||| |||||||||||||| ||||||||||||||||| || Sbjct 187933 ATCGCTTGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCAAAT 187892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194580019447648