Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_018855.1 Length=169158 Score E Sequences producing significant alignments: (Bits) Value seq828 179 4e-40 >seq828 Length=218660 Score = 179 bits (198), Expect = 4e-40 Identities = 150/184 (82%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 43722 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 43781 |||||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||| Sbjct 42310 GGTGGTCAGCACCTGAACGTTAACGTACTGCGTCGTGAAACACTGGAAGATGCGGTTAAA 42251 Query 43782 CATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAAC 43841 ||||| || ||||| || |||||||| || ||||| || || ||||| || || || ||| Sbjct 42250 CATCCTGAGAAATACCCACAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGTTTCAAC 42191 Query 43842 TCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGGACATTTACCGAGAGTCTATAA 43901 || |||||| | ||||||||||| ||||| || | || || || || || || || ||| Sbjct 42190 TCACTGACTGCTGAACAGCAGCGTGACGTGATTACCCGTACTTTCACTGAAAGCCTGTAA 42131 Query 43902 TGGC 43905 | || Sbjct 42130 TCGC 42127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540711957263520