Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_019442.1
Length=60523
Score E
Sequences producing significant alignments: (Bits) Value
seq19589 114 5e-21
seq785 114 5e-21
>seq19589
Length=24186
Score = 114 bits (126), Expect = 5e-21
Identities = 293/446 (66%), Gaps = 0/446 (0%)
Strand=Plus/Plus
Query 29099 ATCCTCGACCAGTTTCTGGATGAAAAGGAAGGCAACCACACCACGGCATACCGTGATGGT 29158
||||||| || ||||| |||||||||||||| || ||||| || | |||||
Sbjct 19197 ATCCTCGGACAATTTCTTGATGAAAAGGAAGGTAATAGTCTGACGGCTTATCAGGATGGC 19256
Query 29159 GCGGGTATCTGGACCATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTTATTCCT 29218
| ||| |||||||| || ||||| || | ||||| | ||||| ||||||
Sbjct 19257 GTGGGGATCTGGACAATTTGCCGCGGCGTTACCCGCATTGATGGGCGCCCTGTTTACAAA 19316
Query 29219 GGCATGAAGCTGTCGAAGGGGAAATGCGACCAGGTTAACGCCATTGAGCGTGATAAGGCG 29278
||||||| || | || ||| |||| | || ||| | || ||||||||
Sbjct 19317 GGCATGACATTGACTGCGGCGAAGTGCGCAGATGTGAACAAATTGGAATCCAATAAGGCG 19376
Query 29279 CTGGCATGGGTGGAGAAAAACATCAAAGTGCCACTGACTGAACCCCAGAAAGCGGGTATT 29338
| | ||||| | | || ||| || | |||||| | || || | || |||||
Sbjct 19377 ATAGAGTGGGTTAAAACTAATGTCACTGTCACGCTGACTCAGCCGCAAATTGCCGGTATC 19436
Query 29339 GCGTCATTCTGTCCTTACAACATTGGCCCAGGTAAGTGTTTCCCGTCGACGTTTTATAAA 29398
|| ||||| || || ||||||||||| || | || || ||| | || ||||| || |||
Sbjct 19437 GCATCATTTTGCCCCTACAACATTGGACCGGCGAAATGCTTCACTTCAACGTTCTACAAA 19496
Query 29399 CGAATTAATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGAC 29458
| | ||||| |||||| | |||||||| | | || ||||| | ||
Sbjct 19497 AAACTAAATGCCGGAGATAAACGTGGTGCCTGTGCTGAAATAAAGCGGTGGGTACGCGAT 19556
Query 29459 GGTGGCAGAGACTGCCGTATTCGCTCAAATAACTGTTATGGTCAGGTCTCACGGCGTGAC 29518
| ||| | ||||||| | || |||||| || | ||| ||||| ||| |||||
Sbjct 19557 GATGGGAAAGACTGCAATGCCCGGGAAAATAATTGCTTTGGGCAGGTGATACGCCGTGAT 19616
Query 29519 CAGGAGAGCGCGCTGGCGTGCTGGGG 29544
||||| |||| || | ||||||||
Sbjct 19617 CAGGAAAGCGAACTAACATGCTGGGG 19642
>seq785
Length=396209
Score = 114 bits (126), Expect = 5e-21
Identities = 89/102 (87%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 24074 TACCGTTATTATCCTGCGCC-CGGCCCTTTAGCTCAGT-GGTGAGAGCGAGCGACTCATA 24131
|||||| || |||| || || ||||||||||||||||| ||| ||||| ||||||||||
Sbjct 187992 TACCGT-ATAATCCCGCACCTCGGCCCTTTAGCTCAGTTGGTTAGAGCACGCGACTCATA 187934
Query 24132 ATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCATAT 24173
||||| |||||||||||||| ||||||||||||||||| ||
Sbjct 187933 ATCGCTTGGTCGCTGGTTCAAGTCCAGCAAGGGCCACCAAAT 187892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 193393789869380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |