Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq742 163 5e-35 >seq742 Length=196864 Score = 163 bits (180), Expect = 5e-35 Identities = 963/1516 (64%), Gaps = 59/1516 (4%) Strand=Plus/Minus Query 212910 TTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGC 212969 || || | |||||| || || || | ||||| || ||| | ||| |||||| |||| Sbjct 48573 TTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGGGT 48514 Query 212970 TCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACC 213029 || | | |||||||| || | |||||| || ||| ||| || |||||||| || | Sbjct 48513 TCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGAGA 48454 Query 213030 AGGAGACTGTTCCTCACTCCGTGC-TCGCCGATGAG-GCGCCGAAGCTCTGCCCAGTCCC 213087 || || |||||| |||||||| |||| ||| || ||| | ||||||| || Sbjct 48453 AGCAGCGAGTTCCTGACTCCGTGTATCGC-GATCTTAGCTTTCAAGG-CAGCCCAGTTCC 48396 Query 213088 A----TCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143 | |||| ||| |||| || |||||| ||| | || | || ||| Sbjct 48395 ACAAATCTGT-----AGG--------CTTCTTGTCCCACATCTCATATTGAAGAATCCCT 48349 Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203 ||||| || || | || |||| | ||| | || | || || |||||||||||| Sbjct 48348 TTGCTGACAGGACATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCTCGCAA 48289 Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263 || | ||| ||| |||| || | || |||||||| | || || || ||| Sbjct 48288 CTTGCTTCCAGAGCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCTGGGCT 48229 Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323 | | | || |||| |||| || |||| ||||| || || | || Sbjct 48228 TTTTCACTCTCAAAAGGCAATCTCATTAAGACAAAAGCATCTGCCAGGCCTTGTATTCCA 48169 Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGAC-TTGGAGCA-CTCCTCCAAGGGGTAAAAGT 213381 || |||||||| | ||| | || ||| || || ||| || | || |||||||||| Sbjct 48168 ATACCGATGGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACA--GGGTAAAAGT 48111 Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441 | |||||| || ||||| | || ||| | ||||| || ||| | | Sbjct 48110 TAACGTCGATAATTTTGTTCAAATTTTTAGTGACAGTCTTGGTTACGATCTTCAGCTTTT 48051 Query 213442 CGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501 | | ||| || | | | |||||| | | ||||| ||||| | Sbjct 48050 CAAAGTCGAATACCTTA------TTATCTACAAACATATTGACAGCGATAGAGGCCAAAT 47997 Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561 |||| || || || || | | ||||| || | || || ||||| ||||| |||| Sbjct 47996 TGCAGACAGCTACTTCATCTTTGGAAGTGTATTCAACTATTTCTGTGCAGAGGTTACTGC 47937 Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCA 213621 | || || ||||| || || ||||| |||| |||| | |||||||| |||| Sbjct 47936 ACTTAATAGTTCCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAGCA 47877 Query 213622 TGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAG-GTACCTG- 213677 ||||||||| || || |||| || || | | || ||| |||| | || ||| Sbjct 47876 TGTAGGGGGTTCCCGTTTCTACTTGAGATTCGATGAT--GGCCATCCACAAAGT--CTGC 47821 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTG 213737 ||||||| | | | | | | | | || || ||||| || ||| || | | Sbjct 47820 GCCTTGATCTTCTTCTT-AGAACGACCTTCG--GCTTCGTAGCGTGTGTACAGAGCCTCA 47764 Query 213738 AATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCA 213796 ||||| | |||||| | || | || ||| || || ||| |||||||| ||||| Sbjct 47763 AATTCTTCTCCCCAGCACTCGTGTAAGCCGGGAGCATCGTGGGGG-CACATGAGACTCCA 47705 Query 213797 GTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855 ||| ||| |||| ||| | || ||||||||| || |||| ||||| || ||| | Sbjct 47704 ATCCTCGTTG-CTCTCGACACGCTTCATGAACAGATCGGGGATCCACAAGCCGTAGAATA 47646 Query 213856 GGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914 ||| | || | || || ||| ||||| || || || |||| || ||||| Sbjct 47645 AGTCACGTGCACGAACT-TCCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAAT 47587 Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971 |||||||||||||||||||| | ||| || || || || || ||||||||| || ||| Sbjct 47586 ATGTCCGCGTGCCACGGCTCAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCC 47527 Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGAC 214031 ||||| || | |||| | ||| | | ||||| | ||| |||| ||| ||||| Sbjct 47526 TGGTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAG 47467 Query 214032 TGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCC 214089 |||||| || ||||| || || || || ||| | | | || |||| || | Sbjct 47466 ACTCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATGCAGTGTACATG--AAGGC 47409 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | || || || || ||||||| | || ||| || || ||| || || ||| || Sbjct 47408 CGATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTT 47349 Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209 | || || ||||| | | | ||| | |||||| || ||||| || | || || | Sbjct 47348 CAATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGG 47289 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 | | | ||| || || |||||||| || | | | || | || || || |||| | Sbjct 47288 CTGCGGAGAATAGAGTAGGGCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAG 47229 Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGT 214329 | || | | |||| ||||| | | |||||| | || |||||| ||||||| Sbjct 47228 TTTCAATGGCTGAATCAATGTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGT 47169 Query 214330 GCTGGGGCCTCTCT--ATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGT 214387 | || || || ||| | ||| || | ||| ||||| || |||||||||| || Sbjct 47168 GTTGCGGTCTTTCTACAACTTTCCCTT--CGATCTTCAGCAGATATGAGCGCTCCAAGGT 47111 Query 214388 CTTGAACCCAAAGTAG 214403 || || ||||||||| Sbjct 47110 TTTAAATCCAAAGTAG 47095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930731285890560