Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq742 163 5e-35
>seq742
Length=196864
Score = 163 bits (180), Expect = 5e-35
Identities = 963/1516 (64%), Gaps = 59/1516 (4%)
Strand=Plus/Minus
Query 212910 TTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGC 212969
|| || | |||||| || || || | ||||| || ||| | ||| |||||| ||||
Sbjct 48573 TTCACAACCTGGAATTCTCCAGACAAGACCCTTCTGGTGTAGATGTTGGAAGTGAAGGGT 48514
Query 212970 TCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACC 213029
|| | | |||||||| || | |||||| || ||| ||| || |||||||| || |
Sbjct 48513 TCAAAGGATTCGTTGTTTCCTAAAATCTGGGCGGTGGAGGCGGTAGGCATGGGTGCGAGA 48454
Query 213030 AGGAGACTGTTCCTCACTCCGTGC-TCGCCGATGAG-GCGCCGAAGCTCTGCCCAGTCCC 213087
|| || |||||| |||||||| |||| ||| || ||| | ||||||| ||
Sbjct 48453 AGCAGCGAGTTCCTGACTCCGTGTATCGC-GATCTTAGCTTTCAAGG-CAGCCCAGTTCC 48396
Query 213088 A----TCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCT 213143
| |||| ||| |||| || |||||| ||| | || | || |||
Sbjct 48395 ACAAATCTGT-----AGG--------CTTCTTGTCCCACATCTCATATTGAAGAATCCCT 48349
Query 213144 TTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAG 213203
||||| || || | || |||| | ||| | || | || || ||||||||||||
Sbjct 48348 TTGCTGACAGGACATCCTGGGTACGTCTCGTATGTACCCTCCTTCTCGGCCAGCTCGCAA 48289
Query 213204 GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCC 213263
|| | ||| ||| |||| || | || |||||||| | || || || |||
Sbjct 48288 CTTGCTTCCAGAGCACCGTAATACAATGTCTCAAATATTTGTTGATTCAGAAGCTGGGCT 48229
Query 213264 TCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCG 213323
| | | || |||| |||| || |||| ||||| || || | ||
Sbjct 48228 TTTTCACTCTCAAAAGGCAATCTCATTAAGACAAAAGCATCTGCCAGGCCTTGTATTCCA 48169
Query 213324 ATGCCGATGGGTCTGTGTCTCAGGTTAGAC-TTGGAGCA-CTCCTCCAAGGGGTAAAAGT 213381
|| |||||||| | ||| | || ||| || || ||| || | || ||||||||||
Sbjct 48168 ATACCGATGGGGCGGTGACGCATGTTCGATGTTCTAGCTTCTGGTACA--GGGTAAAAGT 48111
Query 213382 TGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACT 213441
| |||||| || ||||| | || ||| | ||||| || ||| | |
Sbjct 48110 TAACGTCGATAATTTTGTTCAAATTTTTAGTGACAGTCTTGGTTACGATCTTCAGCTTTT 48051
Query 213442 CGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGT 213501
| | ||| || | | | |||||| | | ||||| ||||| |
Sbjct 48050 CAAAGTCGAATACCTTA------TTATCTACAAACATATTGACAGCGATAGAGGCCAAAT 47997
Query 213502 TGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGC 213561
|||| || || || || | | ||||| || | || || ||||| ||||| ||||
Sbjct 47996 TGCAGACAGCTACTTCATCTTTGGAAGTGTATTCAACTATTTCTGTGCAGAGGTTACTGC 47937
Query 213562 ATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCA 213621
| || || ||||| || || ||||| |||| |||| | |||||||| ||||
Sbjct 47936 ACTTAATAGTTCCCAGATTTTGTTGGTTGCTCTTTCGGTTGCACGCGTCCTTGTACAGCA 47877
Query 213622 TGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGC--TCCAGAG-GTACCTG- 213677
||||||||| || || |||| || || | | || ||| |||| | || |||
Sbjct 47876 TGTAGGGGGTTCCCGTTTCTACTTGAGATTCGATGAT--GGCCATCCACAAAGT--CTGC 47821
Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTG 213737
||||||| | | | | | | | | || || ||||| || ||| || | |
Sbjct 47820 GCCTTGATCTTCTTCTT-AGAACGACCTTCG--GCTTCGTAGCGTGTGTACAGAGCCTCA 47764
Query 213738 AATTCGTGGCCCCAGACCCTGTCCAGTCCCGGA-CAGGATGCGGGACACATGAGGCTCCA 213796
||||| | |||||| | || | || ||| || || ||| |||||||| |||||
Sbjct 47763 AATTCTTCTCCCCAGCACTCGTGTAAGCCGGGAGCATCGTGGGGG-CACATGAGACTCCA 47705
Query 213797 GTCCCCGTCATCTCT-GACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACA 213855
||| ||| |||| ||| | || ||||||||| || |||| ||||| || ||| |
Sbjct 47704 ATCCTCGTTG-CTCTCGACACGCTTCATGAACAGATCGGGGATCCACAAGCCGTAGAATA 47646
Query 213856 GGTCCC-TGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAG 213914
||| | || | || || ||| ||||| || || || |||| || |||||
Sbjct 47645 AGTCACGTGCACGAACT-TCCTCCTTTCCAGTATTCTTTTTCAAGTCTAAGAATTCAAAT 47587
Query 213915 ATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCC 213971
|||||||||||||||||||| | ||| || || || || || ||||||||| || |||
Sbjct 47586 ATGTCCGCGTGCCACGGCTCAACGTAAATAGCGAAAGCTCCGGGCCTCTTGTTTCCTCCC 47527
Query 213972 TGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGAC 214031
||||| || | |||| | ||| | | ||||| | ||| |||| ||| |||||
Sbjct 47526 TGGTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGAG 47467
Query 214032 TGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCC 214089
|||||| || ||||| || || || || ||| | | | || |||| || |
Sbjct 47466 ACTCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATGCAGTGTACATG--AAGGC 47409
Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149
| || || || || ||||||| | || ||| || || ||| || || ||| ||
Sbjct 47408 CGATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTT 47349
Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209
| || || ||||| | | | ||| | |||||| || ||||| || | || || |
Sbjct 47348 CAATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGACAGCTGAGGACGGGGCGTGG 47289
Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269
| | | ||| || || |||||||| || | | | || | || || || |||| |
Sbjct 47288 CTGCGGAGAATAGAGTAGGGCTGGCGTGAGTGAAGTATTTCTCTGACAGAAGGTTGTAAG 47229
Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGT 214329
| || | | |||| ||||| | | |||||| | || |||||| |||||||
Sbjct 47228 TTTCAATGGCTGAATCAATGTCTTCCCCGTGGATACCGACAGATACCCTCATGAGCATGT 47169
Query 214330 GCTGGGGCCTCTCT--ATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGCGCTCCAGAGT 214387
| || || || ||| | ||| || | ||| ||||| || |||||||||| ||
Sbjct 47168 GTTGCGGTCTTTCTACAACTTTCCCTT--CGATCTTCAGCAGATATGAGCGCTCCAAGGT 47111
Query 214388 CTTGAACCCAAAGTAG 214403
|| || |||||||||
Sbjct 47110 TTTAAATCCAAAGTAG 47095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 930731285890560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |