Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq6691 116 7e-21 >seq6691 Length=42033 Score = 116 bits (128), Expect = 7e-21 Identities = 327/508 (64%), Gaps = 11/508 (2%) Strand=Plus/Minus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAG 25878 |||| |||||| |||||| || |||||||| |||| | | || || || || ||| Sbjct 14421 AAGAAGAAGGCAGACTGGGCCCTGCAGTGGATCGGCAGCGACACGGCCACCTTCGGGGAG 14362 Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || |||| ||||| ||| || || || ||||| ||| ||| ||||| ||||| Sbjct 14361 CGTGTGGTGGCCTTCGCTTGCGTAGAAGGAATCTTCTTCTCCGGCAGTTTTGCCTCCATC 14302 Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998 || ||||| ||| || || ||||||||| || ||| ||||||| | ||| | Sbjct 14301 TTTTGGCTGAAGAAGCGTGGCCTCATGCCCGGCTTGACCTTCAGCAACGAGTTGATCTCC 14242 Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058 | ||||||||||||||| | || ||||||||||| | | || ||||| | || Sbjct 14241 CGAGACGAGGGTCTCCACTGCGACTTTGCCTGCCTCATGTTCA---AACACTTAGTACAG 14185 Query 26059 AAAC----CTTCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAA 26114 |||| | | || ||| | ||| |||| |||| || ||||| || || | Sbjct 14184 AAACCCAGCCCCGCACGAGTC---CTA-GCTATCGTCAAGGATGCTGTCATCATTGAACA 14129 Query 26115 GGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAG 26174 ||||||| ||||||||||| | || ||| Sbjct 14128 AGAGTTTCTCACCGACGCCCTGCCCGTCAGACTACTGGGCATGAACTGCGACCTGATGTC 14069 Query 26175 CCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTA 26234 || || ||||| | ||||||||||| || || | ||||| |||| | ||| Sbjct 14068 GCAGTATATTGAATTTGTGGCCGACCGGCTCTTGGTGGACCTGGGCTGTGCCAAGCACTA 14009 Query 26235 CAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTT 26294 | | | ||||| ||| ||| ||||| | || || ||||||| ||||||||||| Sbjct 14008 CGGATCCAAGAACCCCTTCAGCTTCATGGACATGATCTCCCTGGAAGGCAAGACCAACTT 13949 Query 26295 CTTTGAAAAGAGGGTCGGCGACTATCAA 26322 ||| || |||| ||| || || || ||| Sbjct 13948 CTTCGAGAAGAAGGTTGGGGAATACCAA 13921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928045598712960