Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019522.1 Length=48454 Score E Sequences producing significant alignments: (Bits) Value seq725 178 4e-40 >seq725 Length=236385 Score = 178 bits (196), Expect = 4e-40 Identities = 356/526 (68%), Gaps = 4/526 (1%) Strand=Plus/Plus Query 20224 AAAACAAAACTTAGCGCCGCAATGCTGGCTCTG--ATTGCTGCTGGCGCGTCAGCTCCCG 20281 ||||| || ||||| ||||| ||||||| ||| |||| | |||||| || || || | Sbjct 192968 AAAACGAAGCTTAGTGCCGCTGTGCTGGCGCTGGTATTG--GGTGGCGCATCTGCCCCGG 193025 Query 20282 TTCTTATGGCTCAGTTTCAGCAAGAAAAAGAGGGCGTGCGGCTGGTGGCTTACCCAGACG 20341 | || | | ||| || | | | || ||||| || | ||| || || | ||| | Sbjct 193026 CTATTCTCGATCAATTGCTGGATGAGAAAGAAGGTAACAGCCTGACTGCCTATCAAGATG 193085 Query 20342 GCGGCGGAATCTGGACTATTTGCGGCGGTGTAACTCGCGTTGACGGTAAGCCGGTAGTAA 20401 | ||| | ||||| |||||| | || | || || || |||||||||||||| | Sbjct 193086 GTACCGGCCTTTGGACGATTTGCCGTGGCGCAATCCGTGTCGACGGTAAGCCGGTCTATA 193145 Query 20402 AAGGTATGAAGTTGACCGCCGAGCAGTGCGCGAAGATTGATGCTCTGGAGCAGAAAAAGG 20461 ||||||||| | ||||||| | | |||||||| || | || |||||| || |||| Sbjct 193146 AAGGTATGAGGCTGACCGCTGCGAAGTGCGCGCAGGTGAATCGGCTGGAGTCAAACAAGG 193205 Query 20462 CGCTCGACTGGGTGGATCGTAACGTTAAAGTGCCACTCACCGAACCTCAGAAGACAGGGA 20521 || | | ||||||| | ||||| || || ||||| || | ||||||| | || | Sbjct 193206 CGATTGCCTGGGTGAAGGAAAACGTCAACGTTCCACTTACGCAGCCTCAGATTGCTGGCA 193265 Query 20522 TAGCGTCGTTCTGCCCGTGGAATATCGGTCCGGGGCGCTGTTTCCCGTCCACGTTCTACC 20581 | || ||||||||||| | || ||||| || | ||||| | ||||| ||||||| Sbjct 193266 TCGCCTCGTTCTGCCCCTACAACATCGGCCCCTCGAAATGTTTTTCATCCACTTTCTACC 193325 Query 20582 GCAAATTAAATGCTGGTGACCGCATCGGCGCTTGCCGCGAGATTAAACGCTGGATTTGGG 20641 | || | || ||||| || |||||| ||| ||||||| || |||||| | | | Sbjct 193326 GAAAGCTCAACGCTGGCGATAAGCGCGGCGCGTGCAGCGAGATAAAGCGCTGGGTGCGTG 193385 Query 20642 ATGGTGGCCGCGATTGCCGCATACGCTCAAATAACTGTTACGGGCAAATAGAACGCCGTG 20701 | ||||| || ||| | || ||||||| || ||||| | |||||| | Sbjct 193386 ACGGTGGTAAAGACTGCAATGTCCGGGCAAATAATTGCCTTGGGCAGGTGATACGCCGCG 193445 Query 20702 ACCAGGAAGCGGAATTATCGTGCTGGGGATTGGACGGATGAAAATT 20747 | |||||| || | |||||||||| |||| | || | |||| Sbjct 193446 ATCAGGAAAGCGAGCTGACGTGCTGGGGGCTGGATGAATAACAATT 193491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154804558656128