Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_019529.1
Length=111506
Score E
Sequences producing significant alignments: (Bits) Value
seq785 208 5e-49
>seq785
Length=396209
Score = 208 bits (230), Expect = 5e-49
Identities = 294/409 (72%), Gaps = 12/409 (3%)
Strand=Plus/Minus
Query 28562 GGAGTAACTGACAAAGGTTACTTAACAAACTCATTCCACTTAGACGTACTGAAGAAGGTA 28621
|| || ||||| |||||||||| || ||| ||||| | ||||| ||||||||||
Sbjct 141800 GGTGTGACTGATAAAGGTTACTACACCAACAGCTTCCATCTGGACGTCGAGAAGAAGGTA 141741
Query 28622 AACCCGTATGATAAAATCGACTTTGAAGCGCAATTCATCC--CATACAGCTCCGGTGGTC 28679
|| ||||| || ||| ||||||| ||||||| | |||| || |||| ||| |||
Sbjct 141740 AATCCGTACGAAAAACTCGACTTCGAAGCGCCGT--ATCCGCCACTCAGCAACGGCGGTT 141683
Query 28680 ATATCTGCTACGGGGAATTCCCTAATATGCGCCACAATATTGAAGCACTCGAAAATGTGT 28739
|||||||| || |||| |||||| ||| |||||| | |||| || ||| | ||||
Sbjct 141682 TCATCTGCTATGGCGAATACCCTAACCTGCAACACAATCTGAAAGCGCTGGAAGACGTGT 141623
Query 28740 GGGATTACGCCTACACCAAAGTCCCATACTACGGCACCAACACACCAATTGATGAATGCT 28799
|||||||| || ||| || || || |||||||||||||| ||||| ||||||||||
Sbjct 141622 GGGATTACAGTTATACCCGCGTGCCGTATTACGGCACCAACACGCCAATCGATGAATGCT 141563
Query 28800 ATAGCTGCGGATTCAAAGGTGAGTTCAATTGTACAAGCAAAGGTTTTGAGTGTCCTAACT 28859
| |||||| | | || || ||| | || || |||||||| ||| ||||| || |
Sbjct 141562 ACGACTGCGGCTATACCGGCGAATTCGAATGCACCAGCAAAGGATTTACCTGTCCGAAAT 141503
Query 28860 GCGGAAACCACGA----CCCAGAGAAATGCTCTGTCACCAGACGAGTGTGTGGCTACCTA 28915
|||| || ||||| || | | || || |||||| | || |||||||| || ||
Sbjct 141502 GCGGCAATCACGAACCTTCCCGCG---TG-TCAGTCACCCGCCGCGTGTGTGGTTATCTC 141447
Query 28916 GGTAATCCTGGTACTCGTCCATTCAATGCAGGTAAACAGTCAGAAATGA 28964
|| | || | | | ||||| || || || ||||| ||| |||| |||
Sbjct 141446 GGCAGCCCGGATGCCCGTCCGTTTAACGCCGGTAAGCAGGAAGAAGTGA 141398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356395163940358
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |