Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019529.1 Length=111506 Score E Sequences producing significant alignments: (Bits) Value seq785 208 5e-49 >seq785 Length=396209 Score = 208 bits (230), Expect = 5e-49 Identities = 294/409 (72%), Gaps = 12/409 (3%) Strand=Plus/Minus Query 28562 GGAGTAACTGACAAAGGTTACTTAACAAACTCATTCCACTTAGACGTACTGAAGAAGGTA 28621 || || ||||| |||||||||| || ||| ||||| | ||||| |||||||||| Sbjct 141800 GGTGTGACTGATAAAGGTTACTACACCAACAGCTTCCATCTGGACGTCGAGAAGAAGGTA 141741 Query 28622 AACCCGTATGATAAAATCGACTTTGAAGCGCAATTCATCC--CATACAGCTCCGGTGGTC 28679 || ||||| || ||| ||||||| ||||||| | |||| || |||| ||| ||| Sbjct 141740 AATCCGTACGAAAAACTCGACTTCGAAGCGCCGT--ATCCGCCACTCAGCAACGGCGGTT 141683 Query 28680 ATATCTGCTACGGGGAATTCCCTAATATGCGCCACAATATTGAAGCACTCGAAAATGTGT 28739 |||||||| || |||| |||||| ||| |||||| | |||| || ||| | |||| Sbjct 141682 TCATCTGCTATGGCGAATACCCTAACCTGCAACACAATCTGAAAGCGCTGGAAGACGTGT 141623 Query 28740 GGGATTACGCCTACACCAAAGTCCCATACTACGGCACCAACACACCAATTGATGAATGCT 28799 |||||||| || ||| || || || |||||||||||||| ||||| |||||||||| Sbjct 141622 GGGATTACAGTTATACCCGCGTGCCGTATTACGGCACCAACACGCCAATCGATGAATGCT 141563 Query 28800 ATAGCTGCGGATTCAAAGGTGAGTTCAATTGTACAAGCAAAGGTTTTGAGTGTCCTAACT 28859 | |||||| | | || || ||| | || || |||||||| ||| ||||| || | Sbjct 141562 ACGACTGCGGCTATACCGGCGAATTCGAATGCACCAGCAAAGGATTTACCTGTCCGAAAT 141503 Query 28860 GCGGAAACCACGA----CCCAGAGAAATGCTCTGTCACCAGACGAGTGTGTGGCTACCTA 28915 |||| || ||||| || | | || || |||||| | || |||||||| || || Sbjct 141502 GCGGCAATCACGAACCTTCCCGCG---TG-TCAGTCACCCGCCGCGTGTGTGGTTATCTC 141447 Query 28916 GGTAATCCTGGTACTCGTCCATTCAATGCAGGTAAACAGTCAGAAATGA 28964 || | || | | | ||||| || || || ||||| ||| |||| ||| Sbjct 141446 GGCAGCCCGGATGCCCGTCCGTTTAACGCCGGTAAGCAGGAAGAAGTGA 141398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356395163940358