Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq35 262 1e-65 >seq35 Length=455554 Score = 262 bits (290), Expect = 1e-65 Identities = 501/737 (68%), Gaps = 6/737 (1%) Strand=Plus/Plus Query 45488 AAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAAC 45547 |||| || || || || || ||||| |||||| | || || | |||| |||| || ||| Sbjct 112179 AAAGCCGACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAAC 112238 Query 45548 TTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTAT 45607 |||||||| || |||||||| || ||||| ||| | ||| | ||||| || ||| || Sbjct 112239 TTGCAGGAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCAT 112298 Query 45608 GAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTG 45667 ||||| || ||||| | |||||||| || || || ||| ||| || || ||| Sbjct 112299 GAACTCCTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTC 112358 Query 45668 ACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAA 45727 | || |||||||||||||| || ||||||||||| ||||| || | |||||| |||| Sbjct 112359 AGCATCTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAA 112418 Query 45728 TGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAG 45787 ||||| | ||| | ||||||||| || ||||||| | || || || | Sbjct 112419 TGGCGTGCCTGGGGTGCGGCTGACGGCAAGCAAATCGACCAGCTGGCAAATGTGGTTGAA 112478 Query 45788 GAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAG 45847 | | ||| |||| ||||||| || | | ||| || |||||||||| | Sbjct 112479 CAGCTGAAGAAAGACCCTGACTCGCGTCGTATTATCGTGTCTGCATGGAACGTGGGCGAA 112538 Query 45848 TTGGGGGAAATGAAGTTGCCCCCATGTCATTACGC---CTTTCAGTTTTACGTCGCGAAT 45904 ||| | ||| | || | || || | |||| ||| ||||| || || || | Sbjct 112539 CTGGATAAGATGGCGCTGGCACCTTGCC---ACGCTTTCTTCCAGTTCTATGTGGCCGAC 112595 Query 45905 GGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTT 45964 || ||||| ||| | | | ||||| || ||||| || || || |||||||| Sbjct 112596 GGTAAATTGTCCTGCCAGCTGTACCAGCGCTCATGCGATATCTTCCTCGGCTTGCCGTTC 112655 Query 45965 AACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTC 46024 || ||||| ||||| || ||| || |||||| | || |||||||||||||| || || Sbjct 112656 AATATCGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTG 112715 Query 46025 GGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCG 46084 || || | | | || || ||||| || |||||| || || ||||||| || Sbjct 112716 GGTGATTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACG 112775 Query 46085 AAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCG 46144 | ||||| |||| || || || || || |||| || || || || || || || ||| Sbjct 112776 CATCTGCAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCG 112835 Query 46145 CCGTCTATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCG 46204 | || | ||||| || | | ||| ||||| || ||| || || || |||||||| Sbjct 112836 GCCTCCTTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCT 112895 Query 46205 GCGATTAAGGCTCCTGT 46221 || || ||||| ||||| Sbjct 112896 GCAATCAAGGCACCTGT 112912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157621454231476