Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq35 262 1e-65
>seq35
Length=455554
Score = 262 bits (290), Expect = 1e-65
Identities = 501/737 (68%), Gaps = 6/737 (1%)
Strand=Plus/Plus
Query 45488 AAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAAC 45547
|||| || || || || || ||||| |||||| | || || | |||| |||| || |||
Sbjct 112179 AAAGCCGACCGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAAC 112238
Query 45548 TTGCAGGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTAT 45607
|||||||| || |||||||| || ||||| ||| | ||| | ||||| || ||| ||
Sbjct 112239 TTGCAGGAAGGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCAT 112298
Query 45608 GAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTG 45667
||||| || ||||| | |||||||| || || || ||| ||| || || |||
Sbjct 112299 GAACTCCTGTGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTC 112358
Query 45668 ACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAA 45727
| || |||||||||||||| || ||||||||||| ||||| || | |||||| ||||
Sbjct 112359 AGCATCTGGGACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAA 112418
Query 45728 TGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAG 45787
||||| | ||| | ||||||||| || ||||||| | || || || |
Sbjct 112419 TGGCGTGCCTGGGGTGCGGCTGACGGCAAGCAAATCGACCAGCTGGCAAATGTGGTTGAA 112478
Query 45788 GAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAG 45847
| | ||| |||| ||||||| || | | ||| || |||||||||| |
Sbjct 112479 CAGCTGAAGAAAGACCCTGACTCGCGTCGTATTATCGTGTCTGCATGGAACGTGGGCGAA 112538
Query 45848 TTGGGGGAAATGAAGTTGCCCCCATGTCATTACGC---CTTTCAGTTTTACGTCGCGAAT 45904
||| | ||| | || | || || | |||| ||| ||||| || || || |
Sbjct 112539 CTGGATAAGATGGCGCTGGCACCTTGCC---ACGCTTTCTTCCAGTTCTATGTGGCCGAC 112595
Query 45905 GGCCGGTTGTCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTT 45964
|| ||||| ||| | | | ||||| || ||||| || || || ||||||||
Sbjct 112596 GGTAAATTGTCCTGCCAGCTGTACCAGCGCTCATGCGATATCTTCCTCGGCTTGCCGTTC 112655
Query 45965 AACATCGCTAGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTC 46024
|| ||||| ||||| || ||| || |||||| | || |||||||||||||| || ||
Sbjct 112656 AATATCGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAGTG 112715
Query 46025 GGCGAACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCG 46084
|| || | | | || || ||||| || |||||| || || ||||||| ||
Sbjct 112716 GGTGATTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGACG 112775
Query 46085 AAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCG 46144
| ||||| |||| || || || || || |||| || || || || || || || |||
Sbjct 112776 CATCTGCAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACCG 112835
Query 46145 CCGTCTATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCG 46204
| || | ||||| || | | ||| ||||| || ||| || || || ||||||||
Sbjct 112836 GCCTCCTTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCCT 112895
Query 46205 GCGATTAAGGCTCCTGT 46221
|| || ||||| |||||
Sbjct 112896 GCAATCAAGGCACCTGT 112912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157621454231476
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |