Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq725 125 2e-24 >seq725 Length=236385 Score = 125 bits (138), Expect = 2e-24 Identities = 245/360 (68%), Gaps = 8/360 (2%) Strand=Plus/Plus Query 44770 AAAACAAAGTTAAGTGCTGCCGTTCTGGGGCTGGTGCTTGCCGGTGCGTCTGCGTCAGTG 44829 ||||| ||| | ||||| || || |||| |||||| | | || || ||||| | | Sbjct 192968 AAAACGAAGCTTAGTGCCGCTGTGCTGGCGCTGGTATTGGGTGGCGCATCTGCCCCGGCT 193027 Query 44830 ATTCTCGACCAGTTTCTGGACGAAAAAGAAGGCAACCACACCACGGCATACCGAGATGGC 44889 |||||||| || || ||||| || |||||||| ||| | || || || | |||||| Sbjct 193028 ATTCTCGATCAATTGCTGGATGAGAAAGAAGGTAACAGCCTGACTGCCTATCAAGATGGT 193087 Query 44890 TCCGGCATATGGACCATCTGTCGCGGTGCCACAAAGGTGGACGGTAAACCCGTTGTTCGG 44949 ||||| | ||||| || || || || || | || |||||||| || || | Sbjct 193088 ACCGGCCTTTGGACGATTTGCCGTGGCGCAATCCGTGTCGACGGTAAGCCGGTCTATAAA 193147 Query 44950 GGCATGACGCTGTCAAAGGCGAAATGCGACCAGGTTAAC--GCT--ATTGAACGTGACAG 45005 || |||| |||| | ||||| |||| ||||| || ||| | | || ||| Sbjct 193148 GGTATGAGGCTGACCGCTGCGAAGTGCGCGCAGGTGAATCGGCTGGAGTCAA----ACAA 193203 Query 45006 GGCGCTGGCGTGGGTGGAGCGCAATATTAAAGTGCCGCTGACGGAACCACAGAAAGCAGG 45065 |||| | || |||||| || || | || || || || ||| | || |||| || || Sbjct 193204 GGCGATTGCCTGGGTGAAGGAAAACGTCAACGTTCCACTTACGCAGCCTCAGATTGCTGG 193263 Query 45066 TATTGCTTCTTTCTGCCCTTACAACATCGGCCCAGGAAAATGTTTCCCGTCTACGTTCTA 45125 || || || |||||||| |||||||||||||| |||||||| | || || ||||| Sbjct 193264 CATCGCCTCGTTCTGCCCCTACAACATCGGCCCCTCGAAATGTTTTTCATCCACTTTCTA 193323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151290633301636