Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq223 93.3 2e-14 >seq223 Length=511576 Score = 93.3 bits (102), Expect = 2e-14 Identities = 218/328 (66%), Gaps = 11/328 (3%) Strand=Plus/Minus Query 9704 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACCCGGAAACCCGCTATCTCCC 9763 ||| |||||||| || |||||||| ||||| || ||||||||| |||||| | || Sbjct 459873 CGTAAACAAAGTTATTCTCGTCGGTAATCTGGGACAAGACCCGGAAGTCCGCTACATGCC 459814 Query 9764 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCGATCGTTACAAGGACAAAGC 9823 | ||||| ||| | |||||||| || || ||| | || | | |||||||| Sbjct 459813 TAACGGCGGCGCGGTTGCCAACATCACTCTGGCAACGTCTGAGAGCTGGCGTGACAAAGC 459754 Query 9824 CAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCGTCGCCTTCTTCGGCCGCCTCGC 9883 || |||||| |||||| || || |||||||| || | || |||||| | || Sbjct 459753 CACCGGCGAGCAGAAAGAAAAAACGGAATGGCACCGTGTGGTGTTGTTCGGCAAATTAGC 459694 Query 9884 CGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGGTCTACATCGAGGGGCGCA-TCA 9942 || ||| | ||| ||||| || || | |||||||||||| |||||| | Sbjct 459693 AGAAGTCGCAGGCGAATACCTGAAGAAAGGTTCTCAGGTCTACATCGA-AGGCGCACTGC 459635 Query 9943 AAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTC---- 9998 |||| || || ||| ||||| | ||| || ||||| ||||| ||||| Sbjct 459634 AAACCCGTAAATGGACCGATCAGGCTGGCGTTGAAAAATACACCACCGAAGTCGTCGTTA 459575 Query 9999 -----GCCGACAAGATGCAGATGCTCGG 10021 | || || |||||||||||||| Sbjct 459574 ACGTGGGCGGCACCATGCAGATGCTCGG 459547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201152708415762