Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_019919.2 Length=122696 Score E Sequences producing significant alignments: (Bits) Value seq785 116 3e-21 >seq785 Length=396209 Score = 116 bits (128), Expect = 3e-21 Identities = 238/348 (68%), Gaps = 12/348 (3%) Strand=Plus/Minus Query 56559 ACCGAGAAAGAGGTTTACGATGCTTGTCAGGGTCTAGAGTATGAAATTAATACGATGTTC 56618 ||||| |||||| ||| || || | ||| || || ||||| |||||||| || | Sbjct 142709 ACCGAAAAAGAGTGTTATGACGCCTTCCAGTCGCTGGAATATGAGGTTAATACGCTGCAC 142650 Query 56619 AACTCCAATGGCCAGAGTCCATTTATCACATTTGGTTTTGGTCTAGGGACTTCTTGGGAA 56678 | | |||| ||||||| || ||| |||| || |||||||| || || || || |||||| Sbjct 142649 ACCGCCAACGGCCAGACGCCGTTTGTCACCTTCGGTTTTGGCCTCGGCACATCCTGGGAA 142590 Query 56679 GCACGTCTTGTACAGAAAGCAATCCTAGAAGTA--CGCATGGATGGTCTTGGTATCAATA 56736 | || || | ||| || |||| || ||| ||||| | || || || ||| | Sbjct 142589 TCGCGCCTGATCCAGCAATCAATTCTGC--GTAACCGCATTGCCGGACTGGG---CAAAA 142535 Query 56737 AACGCA---CTGCTATATTCCCTAAACTGGTGTTTGTACTTCGTGATGGTGTTAA-CATG 56792 | |||| | ||| ||||||| ||||||||||||| | ||||| || | || ||| Sbjct 142534 ATCGCAAAACCGCTGTATTCCCAAAACTGGTGTTTGCCATCCGTGACGGCCTGAATCATA 142475 Query 56793 GTTCCTGGTGATGTTAACTATGATATCAAGAAGTTAGCCATGAAATGTACTGCTGAACGT 56852 || ||||| | ||||| || |||||| | | || || |||| | | ||| Sbjct 142474 AAGCC-GGTGACGCCAACTACGACATCAAGCAACTGGCACTGGAATGCGCCAGCAAGCGT 142416 Query 56853 ATGTATCCTGATTACATCAGTTATGACAAGGTAGTGGAAGTTACTGGT 56900 ||||| || || | ||| |||||| |||| ||| |||| || ||| Sbjct 142415 ATGTACCCGGACATCCTCAATTATGATCAGGTGGTGAAAGTCACAGGT 142368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392173124094418