Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_020201.1 Length=142349 Score E Sequences producing significant alignments: (Bits) Value seq9405 134 1e-26 >seq9405 Length=40329 Score = 134 bits (148), Expect = 1e-26 Identities = 179/248 (72%), Gaps = 8/248 (3%) Strand=Plus/Minus Query 76558 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGGTTCATGTAGT 76617 ||||||| ||||| ||||| | ||||||||| || ||||||||||||| | | | Sbjct 35877 TCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCAACGCCTGAAAAT 35818 Query 76618 CGATTCGGTCACGGGTCACGTTAACTTCTTCAGGTCGCCAGAAGAACGCCAGTTGCTTTT 76677 |||| ||||| |||| || | || ||||| || ||||||||||| | ||| ||||||| Sbjct 35817 CGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGCTTTT 35758 Query 76678 CAATCAGCTTCTCGAACTTCGCATGTTTCTGCTGGTCGTAGCGAGAAACGTTCGGTGTCT 76737 | ||||| || || || | |||| |||||||||||| | || | |||||| | || Sbjct 35757 CGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACCGACT 35698 Query 76738 CTCCGAGGAACATCGGCTGAGTCAGGAAGTTGA----ATTTGTTTTGGTTGAAAGTGCTG 76793 || | |||||| ||| ||| |||| ||| ||| || ||| ||||| ||| Sbjct 35697 GGCCAAAGAACATTGGC----TCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGTACTG 35642 Query 76794 TAAGACAT 76801 |||| ||| Sbjct 35641 TAAGCCAT 35634 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 77778 CGAGGGGGCTCGAATCCGTTGGTGGAGTTGGTGATTTGGCTGGATGTCTCGCAAGGCATC 77837 || || ||||||| |||||||| | ||||| ||| || || |||||| | |||||| Sbjct 35194 CGCGGTGGCTCGATACCGTTGGTAGCGTTGGAGATCTGCGAAGAGGTCTCGGACGGCATC 35135 Query 77838 ATCGTGGACAGCGTGGAGTTACGCAGGCCATGAATGGCGATGTCGATACGCAGCTTTTCC 77897 | || ||||||||||||||||||||||| || | |||| ||||||| | ||| Sbjct 35134 AGCGCAGACAGCGTGGAGTTACGCAGGCCGTGCGTTTTGATGCTTTCACGCAGCGTATCC 35075 Query 77898 CAATCCA 77904 || |||| Sbjct 35074 CAGTCCA 35068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 454996972091760