Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 109 7e-19
seq742 109 7e-19
>seq6691
Length=42033
Score = 109 bits (120), Expect = 7e-19
Identities = 339/513 (66%), Gaps = 10/513 (2%)
Strand=Plus/Minus
Query 65009 TACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCTCGCT 65068
|||| ||| | |||||||||| | ||||| || | ||| | | || | | |
Sbjct 14432 TACCGTGTGTGAAGAAGAAGGCAGACTGGGCCCTGCAGTGGATCGGCAGCGACACGGCCA 14373
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCA- 65127
|||||| ||||| | | || || || || || || || |||||||||||||| ||
Sbjct 14372 CCTTCGGGGAGCGTGTGGTGGCCTTCGCTTGCGTAGAAGGAATCTTCTTCTCCGG--CAG 14315
Query 65128 TTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
|| ||| | || | |||| |||||||||| || |||||||| ||| | |||| ||
Sbjct 14314 TTTTGCCTCCATCTTTTGGCTGAAGAAGCGTGGCCTCATGCCCGGCTTGACCTTCAGCAA 14255
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGC-TCTTCAAGA 65245
|| | || |||||||| |||||||||||| || |||||| || | | ||||| |
Sbjct 14254 CGAGTTGATCTCCCGAGACGAGGGTCTCCACTGCGACTTTGCC-TGCCTCATGTTCAA-A 14197
Query 65246 CTTTGCGTA-ATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAG 65304
| | ||| | | ||||| ||| | ||| || ||||| || || || ||
Sbjct 14196 CACTTAGTACAGAAACCCAGCCCCGCACGAGTCCTAGCTATCGTCAAGGATGCTGTCATC 14137
Query 65305 ATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAG 65364
||||| ||| ||| || ||||| || || | || | || ||||||| ||
Sbjct 14136 ATTGAACAAGAGTTTCTCACCGACGCCCTGCCCGTCAGACTACTGGGCATGAACTGCGAC 14077
Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCC 65423
|||||| |||| ||||| | |||| | || || ||| | | | || |||||
Sbjct 14076 CTGATGTCGCAGTATATTGAATTTGTGGCCGACCGGCTCTTGGTGGACCTGGGCTGTGCC 14017
Query 65424 ACCCATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAA 65483
| || | | | | ||||| || || ||| ||||| | || ||| || || ||
Sbjct 14016 AAGCACTACGGA-TCCAAGAACCCCTTCAGCTTCATGGACATGATCTCCCTGGAAGGCAA 13958
Query 65484 GACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516
|||||||||||| |||||| |||||||| ||
Sbjct 13957 GACCAACTTCTTCGAGAAGAAGGTTGGGGAATA 13925
>seq742
Length=196864
Score = 109 bits (120), Expect = 7e-19
Identities = 885/1410 (63%), Gaps = 41/1410 (3%)
Strand=Plus/Plus
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
|||| || || ||||| ||||| |||| | |||| |||||||||||||||||||||
Sbjct 47156 GAAAGACCGCAACACATGCTCATGAGGGTATCTGTCGGTATCCACGGGGAAGACATTGAT 47215
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCAAGGTATG-TTCATTCACGCAACACCAAC 75324
|| | | | || || ||| || |||| | | || |||| |||||| | || ||
Sbjct 47216 TCAGCCATTGAAACTTACAACCTTCTGTCAGA-GAAATACTTCACTCACGCCAGCCCTAC 47274
Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384
|| ||| || | || || | || ||| |||| ||||||||| | |||| |
Sbjct 47275 TCTATTCTCCGCAGCCACGCCCCGTCCTCAGCTGTCTTCTTGCTTCCTACTGGCCATGAG 47334
Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444
|| || || | || ||||| | || || | | ||||||| | | || ||||
Sbjct 47335 CGATGATAGTATTGAAGGGATCTACGACACCCTGAAGCAGTGTGCCCTGGTTTCCAAGTC 47394
Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504
||||| ||||| || | || | || | ||||||| || || |||
Sbjct 47395 TGCTGGAGGTATCGGCCTTCATGTACACTGCATCCGAGCCAAGGGTTCCTACATCGCGGG 47454
Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564
|| || || || |||| | | || ||||| || || | || ||| || ||
Sbjct 47455 TACTAACGGAGTCTCCAATGGGTTGGTCCCCATGCTGCGTGTGTACAATAACACGGCCCG 47514
Query 75565 CTATGTAAATCAAGCGGGGCGTCGCAAGGGGTCCA------TCGCGGTCTACTTGGAACC 75618
||||||| | || ||| | |||| || || |||| | ||| | || ||
Sbjct 47515 CTATGTAGACCA---GGGAGGAAACAAGAGGCCCGGAGCTTTCGCTATTTACGTTGAGCC 47571
Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678
||||| || || || | || ||| | || || | || || | || || |
Sbjct 47572 GTGGCACGCGGACATATTTGAATTCTTAGACTTGAAAAAGAATACTGGAAAGGAGGAAGT 47631
Query 75679 TCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737
||| || | | || | || | | ||||||| || || || ||||||||||| || |
Sbjct 47632 TCG-TGCACGTGACTTATTCTACGGCTTGTGGATCCCCGATCTGTTCATGAAGCGTGTCG 47690
Query 75738 AGG--AGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-G 75794
|| | | || | ||| ||| | || || || | || || || | ||| |
Sbjct 47691 AGAGCAACGAGG--ATTGGAGTCTCATGTGCCCCCACGATGCTCCCGGCTTACACGAGTG 47748
Query 75795 CGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATG 75854
| | ||| || || ||||| || || |||||| || |||| || ||| | | ||
Sbjct 47749 CTG-GGGAGAAGAATTTGAGGCTCTGTACACACGCTACGAAGCCGAAGGTCGTTCTAAGA 47807
Query 75855 CGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
|| | | || ||| || || |||| ||| || || |||| || || || |||
Sbjct 47808 AGAAGAT-CAAGGCGCAGACTTTGTGGATGGCCATCATCGAATCTCAAGTAGAAACGGGA 47866
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
|| || || ||||| |||||||| || || ||| ||||| |||||| | ||| |||||
Sbjct 47867 ACCCCCTACATGCTGTACAAGGACGCGTGCAACCGAAAGAGCAACCAACAAAATCTGGGA 47926
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|| || ||| || || || ||||| ||||| | || ||||| || |||||
Sbjct 47927 ACTATTAAGTGCAGTAACCTCTGCACAGAAATAGTTGAATACACTTCCAAAGATGAAGTA 47986
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACT 76093
||||| ||||||||||| || |||| || ||| ||||| || ||| | |
Sbjct 47987 GCTGTCTGCAATTTGGCCTCTATCG--CTGTCAA--TATGT--TTGTAGATAATAAGGTA 48040
Query 76094 TTTGATTATGAAAAACTTCATGAA-ATC---ACAAAGATTGTTACCAAAAATCTAAACCG 76149
|| || | |||||| | |||| ||| || |||| ||| || |||||| | |||
Sbjct 48041 TTCGACTTTGAAAAGC----TGAAGATCGTAACCAAGACTGTCACTAAAAATTTGAACAA 48096
Query 76150 AGTCATTGACAGAAATTTTTATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACA 76208
| | || ||| || ||||| || || ||| || ||| || || ||||| |||
Sbjct 48097 AATTATCGACGTTAACTTTTACCCTGTACCAGA-AGCTAGAACATCGAACATGCGTCACC 48155
Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCAT 76268
| || || ||| | || | ||||| || || |||| ||| | || | | | |
Sbjct 48156 GCCCCATCGGTATTGGAATACAAGGCCTGGCAGATGCTTTTGTCTTAATGAGATTGCCTT 48215
Query 76269 TTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328
|||| || ||||| || ||||| | || ||||| || ||||| |||
Sbjct 48216 TTGAGAGTGAAAAAGCCCAGCTTCTGAATCAACAAATATTTGAGACATTGTATTACGGTG 48275
Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388
| ||||| || ||||| || |||| || | ||| | || ||||| | || |
Sbjct 48276 CTCTGGAAGCAAGTTGCGAGCTGGCCGAGAAGGAGGGTACATACGAGACGTACCCAGGAT 48335
Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT 76448
||| | | ||||| | ||||| | ||| ||||||| | ||| || | | | |
Sbjct 48336 GTCCTGTCAGCAAAGGGATTCTTCAATATGAGATGTGGG-ACAAGAAGCCTA-CAGATTT 48393
Query 76449 ACG--ACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTT 76506
| |||||| || | || | ||| | | || | | ||| || |
Sbjct 48394 GTGGAACTGGGCTGCCTTGAAAGCTAAGATCGCGATACACGGAGTCAGGAACTCGCTGCT 48453
Query 76507 GATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGA 76566
| ||||| ||||| || ||||||||||| || || || || || || |||| ||||||
Sbjct 48454 TCTCGCACCCATGCCTACCGCCTCCACCGCCCAGATTTTAGGAAACAACGAATCCTTTGA 48513
Query 76567 ACCATACACAACAAACATCTACCTGAGAAG 76596
||| | ||| | ||||||||| |||||
Sbjct 48514 ACCCTTCACTTCCAACATCTACACCAGAAG 48543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596056296601920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |