Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq9405 140 2e-28 >seq9405 Length=40329 Score = 140 bits (154), Expect = 2e-28 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 10940 AAAAACGACCAACTGAAGGAGCCGATGTTCTTCGGCCAATCAGTTAACGTATCCCGTTAC 10999 |||||||| || || ||||| |||||||| ||||| || |||||||| |||||| | Sbjct 35661 AAAAACGATCAGCTTCTTGAGCCAATGTTCTTTGGCCAGTCGGTTAACGTTGCCCGTTTC 35720 Query 11000 GACCAACAGAAACATGATGTTTTTGAGAAACTAACTCAGAAGCAACTATCATTCTTCTGG 11059 ||||| ||||| ||||| | ||||| ||||| | | ||||| || || ||||||||| Sbjct 35721 GACCAGCAGAAGCATGAAATCTTTGAAAAACTGATCGAAAAGCAGCTGTCCTTCTTCTGG 35780 Query 11060 CGTCCCGAAGAAGTTGATGTGTCACAAGACCGAATCGA-CTACAGTAAAATGACTGATGC 11118 ||||| ||||| ||||||| || | ||||| ||||| | ||| || | ||| Sbjct 35781 CGTCCGGAAGAGATTGATGTTTCCCGCGACCGTATCGATTTTCAG-GCGTTGCCGGATCA 35839 Query 11119 GGAGAAACACATCTTCATTAGTAACCTGAAGTACCAAAC 11157 || |||||||||||| | || || ||||| ||||| || Sbjct 35840 CGAAAAACACATCTTCCTGAGCAATCTGAAATACCAGAC 35878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342685075187846