Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021343.1
Length=35430
Score E
Sequences producing significant alignments: (Bits) Value
seq14927 244 2e-60
seq785 203 7e-48
>seq14927
Length=58641
Score = 244 bits (270), Expect = 2e-60
Identities = 763/1163 (66%), Gaps = 39/1163 (3%)
Strand=Plus/Minus
Query 25509 GACTATCACCACGGCGTAACCGTCGTCGAAGATAACACCGGCGTCCGTCCGATCACCACG 25568
|| ||||| ||||||||| || || ||| ||| |||| ||| || ||||
Sbjct 29667 GATTATCATCACGGCGTACGAGTTGTTGAAATCAACGACGGCACCCGCGTTATTTCCACC 29608
Query 25569 ATCTCGACGGCCGTTATCGGTGTCGTCTGTACCGGCGACGATGCCGAC-CCGATCACGTT 25627
| || || ||| | ||||| | ||||| |||| || ||||| ||| |||| | ||||
Sbjct 29607 GTTTCCACCGCCATCATCGGGATGGTCTGCACCGCAGAAGATGCGGACGCCGA-CGCGTT 29549
Query 25628 CCCGCTGAACAAGCCGGTGCTGCTCACGAACGTGCAGGCCGCGCTCGGCAAGGCGGGCCG 25687
|||||| | | ||||||||| |||| ||||| | | |||| |||||||||||
Sbjct 29548 CCCGCTCGATACGCCGGTGCTTATCACCAACGTACTGACCGCCGCAGGCAAGGCGGGTAA 29489
Query 25688 AAAGGGCACGCTGTACACGACGCTCGATG-CGATCCAGAAACAGGCCCGCCCGTACACCG 25746
|| |||||||| | | | || |||| | ||| || ||||| ||| ||
Sbjct 29488 AACCGGCACGCTCCGCGCCTCCCT-GATGGCAATCGCCAACCAGGCTAAACCGGTTGTCG 29430
Query 25747 TCGTGGTGCGCGTCCCGCAAGGCAAGGATTCG--GCGGAAACCACGTCGAACATTGTCGG 25804
|||| || |||||| | | || | | || ||| ||||||| || ||||| ||||
Sbjct 29429 TCGTTGTTCGCGTCGCAGAGGGTGA--AACCGACGCGCAAACCACCTCAAACATCATCGG 29372
Query 25805 CACCGTGAATGCCGACGGCACGAAAACCGGGCTCAAGGCGCTCGAATCGGCGCCGTCCGT 25864
| | | | ||||| | | ||||| | || || || || |||| | |
Sbjct 29371 CGGTTCGGACGAAACCGGCATGTATACCGGCATGAAAGCCCTGCTGTCTGCGCAAACTGA 29312
Query 25865 GGTGCAGGTGAAGCCGCGGATTCTGGCGGTTCCGGGGCTCGATACGCAGCCCGTCGCGAA 25924
| || |||||||| ||||| | || |||||||| |||| ||| ||||| |
Sbjct 29311 ACTCGGCGTAAAGCCGCGCATTCTCGGCGTGCCGGGGCTTGATAATCAGGAAGTCGCTAC 29252
Query 25925 CGCGCTGGCATCCACCGGGCAACTGCTGCGTGCGATGGCGTACGTCGCGGCTCGCAACGA 25984
||||| || || | | || | ||| || || | | |||||| || || | |
Sbjct 29251 GGCGCTCGCCGCCGTCTGTCAGCAGCTCCGCGCCTTTGGCTACGTCA--GCGCGTACGG- 29195
Query 25985 GACGGGGGAACTG-GTCGCCACGC-AGGAAGAGGCGGTGGCCTACCGGAAGAAGTTCGGT 26042
| | ||| | ||| | | || | ||| ||||| | || ||| |
Sbjct 29194 --CTGCAAAACCGTGTC-CGATGCCATCAAG-----------TACCGCGACAATTTCAGC 29149
Query 26043 CAACGCGAAGTGATGGTGATCTGGCCGGATTTCGTCGCATGGGACGACGCCGCGTCGAAA 26102
|| || || ||||||| ||||||| |||||||| | ||| || | || | ||
Sbjct 29148 CAGCGTGAGCTGATGGTTGTCTGGCCTGATTTCGTGTCCTGGAACACCACCACC---AAT 29092
Query 26103 G--AG-GTTGAAGTGCCCGCCGTAGCGTATGCGGTCGGCCTGCGCGCGAAGATCGATCAA 26159
| || | | | ||||||| || || ||| |||||||||| || || ||||| |
Sbjct 29091 GCCAGCGATATCGCGCCCGCCACCGCTTACGCGCTCGGCCTGCGTGCCAAAATCGACGCA 29032
Query 26160 CAAACCGGCTGGCATAAGACGCTCTCGAACGTCGCTGTGAATGGCGTCGAAGGGAT--CA 26217
|||||||||||||||| ||||| |||||||| | | || |||||| || | |
Sbjct 29031 GAAACCGGCTGGCATAAAACGCTTTCGAACGTTGGGATCAACGGCGTCACCGGCCTGTCT 28972
Query 26218 GCAAGCCGGTTTCGTGGGATTTGCAGAAC-CCGGCGACCGATGCGGGTTTCCTCAACGAG 26276
|| ||| || | ||||||||||||| | ||||| |||||||| | | || ||| ||
Sbjct 28971 GCCAGC--GTGTACTGGGATTTGCAGACCACCGGC-ACCGATGCCGACCTGCTGAACCAG 28915
Query 26277 AATCAGGTCACGACGCTGATCAACCGGAACGGCTTCCGATTCTGGGGCTCGCGCACGGCG 26336
|| || ||||| ||| | ||||||| |||||||| ||||||
Sbjct 28914 GCGTGCGTGACCACGCTTATCCGCAAAGACGGCTTTAAGTTCTGGGGGCAGCGCACCTGC 28855
Query 26337 TCCGACGATCCGCTGTTCGCGTTCGAAAACTACACGCGCACGGCGCAGGTGCTGGCCGAT 26396
|| || |||||||||||| ||| || ||||| || ||||| |||||||||||||| ||
Sbjct 28854 TCTGATGATCCGCTGTTCCTGTTTGAGAACTATACCCGCACCGCGCAGGTGCTGGCGGAC 28795
Query 26397 ACGATGGCCGAAGCACAGATGGTCGTTATCGACGGCGCGATGATTCCGGCGCTACCGCGC 26456
|| ||||| ||||| || || | || ||| | | |||| ||| ||||
Sbjct 28794 ACCATGGCAGAAGCGCACCTGTGGGCGATGGACAGGCCAATGACCCCGACGCTTATCAAA 28735
Query 26457 GACGTGATCGAGGGCATCAACGCAAAAATGCGTGAAATGAAAACCAAGGGCCAGTTGATC 26516
||| |||| | |||||| ||||| || |||| ||||||||| | || | | | ||
Sbjct 28734 GACATGATTGCGGGCATTAACGCCAAGCTGCGCGAAATGAAATCTGCCGGTCTGATCATT 28675
Query 26517 GGCGGCTCGGCGTGGTTCGACGCGGAACAGAACGGCGTTGTGGCGCTGAAAGATGGCAAA 26576
| || | |||| |||| | ||| |||| ||| | | ||||||| |||||
Sbjct 28674 GATGGTACCTGCTGGTACGACCCCGAAGCGAACACCGTCGACACCCTGAAAGCGGGCAAG 28615
Query 26577 GCGGTGATCAATTACGACTACACGCCGGTGCCCCCGCTGGAAAACCTCACGCTGCGCCAG 26636
| | || |||| ||||| ||||||||||| ||||||||| | | || ||||| |||
Sbjct 28614 CTGTTCATTGATTATGACTATACGCCGGTGCCGCCGCTGGAAGATTTAACCCTGCGTCAG 28555
Query 26637 AAGATCACCGACCAGTATCTGGC 26659
|||||||| ||||| |||||
Sbjct 28554 CGCATCACCGATCAGTACCTGGC 28532
Score = 127 bits (140), Expect = 5e-25
Identities = 362/548 (66%), Gaps = 19/548 (3%)
Strand=Plus/Minus
Query 11074 GCATCCTCGGCCGTGACGATCTGCCGCCATTGCCCGTCGCCGCACTGGCGCCCGCGTGCA 11133
|||||||| |||||||| |||||||| || ||||||||||| | |||| ||
Sbjct 43486 GCATCCTCAATGGTGACGATTTGCCGCCACTGTCCGTCGCCGCAAAGCTGCCCTTTCGCC 43427
Query 11134 AGCGACGT-ATGGGAAATGTCGATCTCGACGCGCTCGTCGTCGGGACGGTCGCG------ 11186
|| | ||| |||| || || | ||| | | ||| | | || || ||
Sbjct 43426 AGGG-CGTGATGGCTGATATCCAGCTCAATCCT---GTCATTGCGATCTTCCCGTCCCTT 43371
Query 11187 GTTGAAGTCCGCGCCAGTCCAAAACGCATAGGCTTCGTGCGTCGTTGTGGATGGCGTAGA 11246
|||||| | || | ||| |||| ||| || |||||||| || || || || ||
Sbjct 43370 GTTGAACAGTTCTCCTGACCAGAACGGATACGCGCCGTGCGTCAGTGCTGACGGGGTGGA 43311
Query 11247 GAAGTGCGTCATCCGCAAATGCGAATGCGTCGCCATCCCCTTCGCTACCTTGTTCAG-TT 11305
||| | || | |||| ||| |||| |||||| || | || |||||| ||| ||
Sbjct 43310 GAAATAGGTGGTGCGCAGATGTTCCTGCGACGCCATGCCGCTGGCAACCTTGCGCAGCTT 43251
Query 11306 CGGCAAACTTGCTGACCCAGAAATACTCATCGAAATACAGGTCGCCGTTGTAGCTTTGGG 11365
| | ||| | | || ||| || || || | ||||||||||| || | ||||||||
Sbjct 43250 CTGGAAATTCGG-GATCCAAAAGATTTCGTCCACGTACAGGTCGCCATTATGGCTTTGGG 43192
Query 11366 CCGTGCGTGAACTGGTGCCGAGAAAAATCAATTCCGCACCGT--TCGACAACCGC-ATCG 11422
| ||| || ||||||| | ||||||| | || |||| | | | | | | ||||
Sbjct 43191 CGGTGTTGGAGTTGGTGCCTAAGAAAATCAGCTTTGCGCCGTTGTTGCCGATCACAATCG 43132
Query 11423 GATCGCCGGTTAGCTCAACCTGCGCAGCGTTCCACGCAAATTTCTGGATATACGAGCGGA 11482
| || || || |||||||| | || | | | ||||| | ||| || || |
Sbjct 43131 GGTCACCCGTCAGCTCAACAT---CAACCTGGCGGGCAAACTGAATGATGTATTCACGAA 43075
Query 11483 ACACGTGTGCCTGTGCGCGGCTCGCCGACAGAAAAATCTGATTCGTGCCGGTTTCCAGCG 11542
|||||| ||||| | || || ||||| |||||||| || |||||| | || |
Sbjct 43074 ACACGTAAGCCTGAGTTTTACTGGCTGACAGGAAAATCTGGTTATGGCCGGTCGCTAGGG 43015
Query 11543 CGCGCACGAGTGCCTCGTGCGCGAAATAGAACGTGGCGCCGATCTGTCGTGACTTCAGGA 11602
|||||| || || ||| | || || ||||||| |||||||| ||||| || || || |
Sbjct 43014 CGCGCAGCAGAGCTTCGCGGGCAAAGAAGAACGTCGCGCCGATTTGTCGCGATTTGAGAA 42955
Query 11603 TGTTGCGG 11610
||| ||||
Sbjct 42954 TGTCGCGG 42947
>seq785
Length=396209
Score = 203 bits (224), Expect = 7e-48
Identities = 436/638 (68%), Gaps = 28/638 (4%)
Strand=Plus/Minus
Query 26025 TACCGGAAGAAGTTCGGTCAACGCGAAGTGATGGTGATCTGGCCGGATTTCGTCGCATGG 26084
||||| |||| ||| |||| |||||| ||||| ||||||||||||| || || |||
Sbjct 375518 TACCGCGAGAACTTCAGTCAGCGCGAACTGATGCTGATCTGGCCGGACTTTGTTAACTGG 375459
Query 26085 GACGACGCCGC------GTCGAAAGAGGTTGAAGTGCCCGCCGTAGCGTATGCGGTCGGC 26138
| |||| | |||| | | | | | |||| | ||| | | |||
Sbjct 375458 AATACCGCCACCAGCCAGTCGGATATCGCTTATGCCACCGC--TCGCG----CTCTGGGC 375405
Query 26139 CTGCGCGCGAAGATCGATCAACAAACCGGCTGGCATAAGACGCTCTCGAACGTCGCTGTG 26198
| ||||| || ||||| || |||||||||||||||| || || || ||||||| |||
Sbjct 375404 TTACGCGCCAAAATCGACCAGGAAACCGGCTGGCATAAAACCCTGTCAAACGTCGGCGTG 375345
Query 26199 AATGGCGTCGAAGGGA---TCAGCAAGCCGGTTTCGTGGGATTTGCAGAAC-CCGGCGAC 26254
|| || || || || ||||| ||| || | |||||||||||| ||||| ||
Sbjct 375344 AACGGGGT-GACCGGCCTTTCAGCCAGC--GTCTTCTGGGATTTGCAGGCGACCGGC-AC 375289
Query 26255 CGATGCGGGTTTCCTCAACGAGAATCAG-GTCACGACGCTGATCAACCGGAACGGCTTCC 26313
|| || | | | || ||||| | | | ||||| |||||| | | |||||||||
Sbjct 375288 TGACGCCGATCTGCTGAACGA-AGCCTGTGTCACCACGCTGGTTCGCAAAGACGGCTTCC 375230
Query 26314 GATTCTGGGGCTCGCGCACGGCGTCCGACGATCCGCTGTTCGCGTTCGAAAACTACACGC 26373
| ||||||||| || || ||| || || ||||| ||| ||||||||||| |
Sbjct 375229 GTTTCTGGGGCAACCGTACCTGCAGCGATGACACGTTGTTCCTGTTTGAAAACTACACCC 375170
Query 26374 GCACGGCGCAGGTGCTGGCCGATACGATGGCCGAAGCACAGATGGTCGTTATCGACGGCG 26433
| || ||||| |||||||||||||| ||||| ||||| || ||| | ||||
Sbjct 375169 GTACCGCGCAAGTGCTGGCCGATACCATGGCTGAAGCGCATATGTGGGCGGTCGATAAAC 375110
Query 26434 CGATGATTCCGGCGCTACCGCGCGACGTGATCGAGGGCATCAACGCAAAAATGCGTGAAA 26493
| |||| || | || |||||| ||||||| |||||||| || |||||||| ||||
Sbjct 375109 CAATGACGCCCTCACTGGTTCGCGACATGATCGACGGCATCAAAGCCAAAATGCGCGAAA 375050
Query 26494 TGAAAACCAAGGGCCAGTTGATCGGCGG-CTCGGCGTGGTTCGACGCGGAACAG--AACG 26550
||||| | ||| | | || | ||| | || |||| ||| || ||| | |||
Sbjct 375049 TGAAATCAGCGGGTTACATCATTGACGGTGACTGC-TGGTACGA--CGAAACCGCAAACA 374993
Query 26551 GCGTTGTGGCGCTGAAAGATGGCAAAGCGGTGATCAATTACGACTACACGCCGGTGCCCC 26610
| | | ||||||| |||||| | ||| ||||||||||||| ||||| || |
Sbjct 374992 CAGCGGAAACCCTGAAAGCCGGCAAACTGTATATCGATTACGACTACACCCCGGTTCCTC 374933
Query 26611 CGCTGGAAAACCTCACGCTGCGCCAGAAGATCACCGAC 26648
| |||||| | || || ||||||||| |||||||||
Sbjct 374932 CACTGGAAGATCTGACCCTGCGCCAGCGTATCACCGAC 374895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113161825428736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |