Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021529.2
Length=247511
Score E
Sequences producing significant alignments: (Bits) Value
seq785 136 6e-27
>seq785
Length=396209
Score = 136 bits (150), Expect = 6e-27
Identities = 237/342 (69%), Gaps = 2/342 (1%)
Strand=Plus/Minus
Query 173221 TGGAAAGAACTGACTGGTTACGGATTTAGTCTGTACAGCACACCAAGCGAATCGCTATGT 173280
|||||||| || || ||||| || || ||||||||||| || |||||| || ||
Sbjct 141905 TGGAAAGACGAAACGGGCTACGGTTTCAGCCTGTACAGCACGCCGAGCGAAAACCTGTGC 141846
Query 173281 GATCGTTTCTGTCGTCTTGATCAAGAGAAGTACGGTATCATTACTGGTATCAATGACAAA 173340
|| || ||||||||||| ||| ||| | | ||| | | | ||| | | ||| |||
Sbjct 141845 GACCGCTTCTGTCGTCTGGATAAAGCCGAATTCGGGCTGGTGGCCGGTGTGACTGATAAA 141786
Query 173341 GACTACTATACAAACTCGTTCCACTTAGACGTATTCAAGAAAGTGAATCCGTTCGAGAAG 173400
| ||||| || ||| ||||| | ||||| ||||| || ||||||| ||| ||
Sbjct 141785 GGTTACTACACCAACAGCTTCCATCTGGACGTCGAGAAGAAGGTAAATCCGTACGAAAAA 141726
Query 173401 ATTGACTTTGAAGCATCGTACCCAGCA-TATGCAAACGGCGGTTTCATTTGCTATGCAGA 173459
| ||||| ||||| |||| || || | |||| |||||||||||| ||||||| ||
Sbjct 141725 CTCGACTTCGAAGCGCCGTATCCGCCACTCAGCAA-CGGCGGTTTCATCTGCTATGGCGA 141667
Query 173460 GTTCCCGAACATGCGCGACAATATCAAAGGTCTAGAACGTGTATGGGATTATGCTCATAG 173519
| ||| ||| ||| ||||| | |||| || ||| || |||||||| | |||
Sbjct 141666 ATACCCTAACCTGCAACACAATCTGAAAGCGCTGGAAGACGTGTGGGATTACAGTTATAC 141607
Query 173520 CAAAGTTGCTTACTTCGGTACAAACACACCGATTGATCAATG 173561
| || | || | ||| || ||||| || || ||| ||||
Sbjct 141606 CCGCGTGCCGTATTACGGCACCAACACGCCAATCGATGAATG 141565
Score = 125 bits (138), Expect = 1e-23
Identities = 530/828 (64%), Gaps = 23/828 (3%)
Strand=Plus/Minus
Query 171958 AAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGGT 172017
|| || || || || |||||| ||||||||||| || ||||||| || | || |||
Sbjct 143153 AACGAGAATGCCAACAAAGACAGCAAAGTGATCCCGACCCAGCGTGACCTGCTGGCGGGT 143094
Query 172018 ACAGTTGCGAAACAATACGCACTCGAAGACTTTCTACCGAAGCACAT--TGCAGAAGCAC 172075
| || || || || ||||| | | || ||||| | | ||| | || |
Sbjct 143093 ATTGTCGCCAAGCATTACGCCAAACAGCATATTTTACCGCGTGATGTCGTGCTG--GCGC 143036
Query 172076 ATATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAATTCA 172135
|| ||||||| || |||| |||||| | ||||| || || || ||| || |
Sbjct 143035 ATGAGCGTGGCGAAATCCATTATCATGACCTCGATTATTCCCCGTTCTTCCCGATGTTTA 142976
Query 172136 ACTGTATGCTTATTGATATCAAAGGCATGCTTGAAA-ACGGATTTAAAATGGGTAATGCT 172194
|||| ||||| || || | ||||||||| ||||| |||| || ||||||||||||||
Sbjct 142975 ACTGCATGCTGATCGACCTTAAAGGCATG-TTGAATCACGGTTTCAAAATGGGTAATGCG 142917
Query 172195 GAGATCGAAGAGCCAAACAGTATCGCGACTGCTGCGACTATTGTCACTCAGATCATACAA 172254
|| || || |||||| ||| | || || || | | | | ||||| ||
Sbjct 142916 GAAATTGACACGCCAAAGTCTATTTCCACCGCAACGGCCGTCACCGCGCAGATTATCGCG 142857
Query 172255 CAAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGAAGTTCTAGCA 172314
|| || || || ||||||||||||| || |||| | || |||||||| || ||
Sbjct 142856 CAGGTCGCCAGCCATATTTACGGCGGCACGACCATTAACCGCATCGACGAAGTACTGGCG 142797
Query 172315 CCATATGTTCGTAA--GTCGTATT--ACAAATGGCTTGAGGTTGGTCGCGAAGAGCATCC 172370
|| |||||| | | | || | ||| | | || || ||||||| |
Sbjct 142796 CC----GTTCGTCACCGCCAGCTTCAATAAACATCGTCAGACTG---CCGAAGAG-TGGC 142745
Query 172371 CGATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAGAAACGTACGA 172430
|||| || | || | | |||||| | | ||| ||| ||||| || ||
Sbjct 142744 AGATT-----GCAGATGCGGATGGCTTTGCTCACAGCCGTACCGAAAAAGAGTGTTATGA 142690
Query 172431 CGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGACGCC 172490
||| || || || | || ||| | ||||| || |||| || | ||||| ||||||||
Sbjct 142689 CGCCTTCCAGTCGCTGGAATATGAGGTTAATACGCTGCACACCGCCAACGGCCAGACGCC 142630
Query 172491 ATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGAAATG 172550
|| || | || || || || ||||| |||||| || || ||| |||
Sbjct 142629 GTTTGTCACCTTCGGTTTTGGCCTCGGCACATCCTGGGAATCGCGCCTGATCCAGCAATC 142570
Query 172551 CATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCCCGAA 172610
||||||| || || ||||| || || ||||| | ||||| || | ||||| ||
Sbjct 142569 AATTCTGCGTAACCGCATTGCCGGACTGGGCAAAAATCGCAAAACCGCTGTATTCCCAAA 142510
Query 172611 ACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACGGCAT 172670
||| || || | ||| || || |||| |||| || || | |||| |||
Sbjct 142509 ACTGGTGTTTGCCATCCGTGACGGCCTGAATCATAAAGCCGGTGACGCCAACTACGACAT 142450
Query 172671 TAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCTATGA 172730
||| | || ||||| |||||||| || ||||| ||||| || || ||| | | |||||
Sbjct 142449 CAAGCAACTGGCACTGGAATGCGCCAGCAAGCGTATGTACCCGGACATCCTCAATTATGA 142390
Query 172731 AAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCG 172778
|| | || || || || ||| || | |||||||| || ||
Sbjct 142389 TCAGGTGGTGAAAGTCACAGGTTCGTTCAAAACGCCGATGGGCTGCCG 142342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 791225823247440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |