Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021531.1
Length=223989
Score E
Sequences producing significant alignments: (Bits) Value
seq35 251 1e-61
>seq35
Length=455554
Score = 251 bits (278), Expect = 1e-61
Identities = 241/309 (78%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 98895 ATGAAACAGTATCAAGATTTAATGGCTGAAGTCTTTGCGAAAGGTACGCCGAAGAAAGAC 98954
||||||||||||| ||||||||| |||| | | | || || || || |||
Sbjct 112128 ATGAAACAGTATCTGGATTTAATGCAGAAAGTGCTCGATGAGGGCACCCCTAAAGCCGAC 112187
Query 98955 CGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCAACTTGCAAGAA 99014
||||||||||| |||||| | || || || || || |||||||||||||||||||| |||
Sbjct 112188 CGTACCGGTACGGGCACGTTGTCGATTTTTGGTCATCAGATGCGTTTCAACTTGCAGGAA 112247
Query 99015 GGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCCATGAACTGCTG 99074
|||||||||||||| |||||||| || ||||| | ||||| ||||| |||||||| |||
Sbjct 112248 GGTTTCCCGCTGGTCACGACCAAACGCTGCCATTTACGCTCCATTATTCATGAACTCCTG 112307
Query 99075 TGGTTCCTGAAAGGCGACACCAATATCCAGTACCTGAAAGATAATGGTGTAACCATTTGG 99134
||||||||||||||||| || || || || ||| || || ||| | ||| |||
Sbjct 112308 TGGTTCCTGAAAGGCGAAACTAACATTGCTTATCTGCGTGAAAACAATGTCAGCATCTGG 112367
Query 99135 GACGAATGGGCGGACAAAAATGGCGACCTCGGTCCGGTATACGGTAAGCAGTGGCGGGCA 99194
||||| ||||| ||| |||| ||||||||||| ||||| ||||| ||||| ||||| ||
Sbjct 112368 GACGAGTGGGCTGACGAAAACGGCGACCTCGGACCGGTTTACGGCAAGCAATGGCGTGCC 112427
Query 99195 TGGACTGCG 99203
||| ||||
Sbjct 112428 TGGGGTGCG 112436
Score = 127 bits (140), Expect = 3e-24
Identities = 228/328 (70%), Gaps = 4/328 (1%)
Strand=Plus/Plus
Query 99583 GTAAGTTGTCTTGTCAGCTCTATCAGCG-TAGTGCCGACGTGTTCTTGGGTGTGCCGTTT 99641
|||| ||||| || ||||| || ||||| | ||| || | ||| | || |||||||
Sbjct 112597 GTAAATTGTCCTGCCAGCTGTACCAGCGCTCATGC-GATATCTTCCTCGGCTTGCCGTTC 112655
Query 99642 AACATCGCGTCGTATGCTCTACTGATTCACATGTTTGCACAGCAG-GCGAATATGGCGGT 99700
|| ||||| || || || ||| | || ||| | || || || |||| || | |
Sbjct 112656 AATATCGCCAGCTACGCACTGCTGGTGCATATGATGGCGCAACAATGCGACCTTGAAG-T 112714
Query 99701 GGGCGATTTCGTCTGGACCGGCGGTGATGTGCATCTGTATTCTAACCATCTGGAACAGGC 99760
||| ||||| |||||||| || || ||| ||| ||||| ||||| |||||||| |
Sbjct 112715 GGGTGATTTTGTCTGGACGGGTGGCGATACGCACCTGTACAGCAACCACATGGAACAGAC 112774
Query 99761 ACGTACTCAGTTAGGTCGTACTCCGCGTGCGTTGCCTAAGCTGATTATCAAACGTAAGCC 99820
| | || | | ||| || ||||||||||| || || | || || || || ||
Sbjct 112775 GCATCTGCAACTGAGCCGTGAACCCCGTGCGTTGCCAAAACTTGTCATTAAGCGCAAACC 112834
Query 99821 GGACTCTATCTTCGACTATAAGTTCGAAGATTTTGATATCGAAGGCTACGACCCACACCC 99880
|| ||| | || || || || ||||||||||| || || ||||| ||||| || |||||
Sbjct 112835 GGCCTCCTTGTTTGATTACAACTTCGAAGATTTCGAGATTGAAGGGTACGATCCGCACCC 112894
Query 99881 GGCTATTAAAGCACCGGTGGCGATATGA 99908
|| || || ||||| || || || |||
Sbjct 112895 TGCAATCAAGGCACCTGTCGCTATCTGA 112922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716020187781360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |