Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021534.1
Length=47552
Score E
Sequences producing significant alignments: (Bits) Value
seq223 161 3e-35
seq25848 91.5 4e-14
>seq223
Length=511576
Score = 161 bits (178), Expect = 3e-35
Identities = 215/299 (72%), Gaps = 0/299 (0%)
Strand=Plus/Minus
Query 33176 GAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATA 33235
|||| | |||||||| || | | || | ||| ||||||||||||||||| || |
Sbjct 459877 GAGGCGTAAACAAAGTTATTCTCGTCGGTAATCTGGGACAAGACCCGGAAGTCCGCTACA 459818
Query 33236 TGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCAGTGGAACGATA 33295
||||| |||||||| || ||| | |||||||||| || ||| ||| || |
Sbjct 459817 TGCCTAACGGCGGCGCGGTTGCCAACATCACTCTGGCAACGTCTGAGAGCTGGCGTGACA 459758
Query 33296 AAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAGC 33355
|||| || || || ||||||| | || |||||||| || ||||| | ||||| ||
Sbjct 459757 AAGCCACCGGCGAGCAGAAAGAAAAAACGGAATGGCACCGTGTGGTGTTGTTCGGCAAAT 459698
Query 33356 TGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAAT 33415
| ||||| || || |||||||||||| ||||| |||||||| || | ||||| |
Sbjct 459697 TAGCAGAAGTCGCAGGCGAATACCTGAAGAAAGGTTCTCAGGTCTACATCGAAGGCGCAC 459638
Query 33416 TACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTACTGAAATCGTC 33474
| | || || |||||||| ||||| || |||||||||||||| || ||| |||||
Sbjct 459637 TGCAAACCCGTAAATGGACCGATCAGGCTGGCGTTGAAAAATACACCACCGAAGTCGTC 459579
>seq25848
Length=116905
Score = 91.5 bits (100), Expect = 4e-14
Identities = 182/270 (67%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 33163 ATTATGGCATCTCGAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCG 33222
|| |||||| || ||||| |||||||| ||||| |||| | | | || || | |||
Sbjct 107977 ATCATGGCAGAACGTGGAATTAACAAAGTCATCATCGTGGGTAATTTAGGTCAGGCACCG 108036
Query 33223 GAAGTTAAATATATGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAG 33282
|| | || ||||| |||||||| ||| | ||| | ||||| || || ||
Sbjct 108037 GAGCTGCGCTACATGCCGAACGGCGGCGCGGTGGCGAGCCTGACGCTGGCCACGTCCGAA 108096
Query 33283 CAGTGGAACGATAAAGCAACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTT 33342
| ||| || ||||| || || || || || | || || ||||| ||||||||
Sbjct 108097 AACTGGCGTGACAAAGCCACCGGCGAGCAGCGCGAAAAAACCGAGTGGCACCGCGTGGTC 108156
Query 33343 ATCTTCGGAAAGCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTAT 33402
| |||||||||||||| || | || || ||||||||| ||| ||| | | || ||
Sbjct 108157 GTGTTCGGAAAGCTGGCCGAAATTGCCGGTGAATACCTGACCAAGGGCGCAAAAGTCTAC 108216
Query 33403 GTAGAAGGAAAATTACGTACTCGCAAATGG 33432
| ||||| | | | || |||||||||
Sbjct 108217 ATCGAAGGCCAGCTGCAGACCCGCAAATGG 108246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 151920518010312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |