Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq6488 141 4e-29 seq6760 96.9 2e-15 >seq6488 Length=277817 Score = 141 bits (156), Expect = 4e-29 Identities = 254/366 (69%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 12349 AGGTTCTGCTGGTGTAGACTTACGCGCTAACACCTCTGAAC-CATTTG---AATTGAAAC 12404 ||| ||||| ||| | || |||||||| |||| || ||| || || |||||| Sbjct 43160 AGGGTCTGCGGGTCTGGATTTACGCGCCTG----TCTGGACGCATCTGTAGAACTGAAAC 43105 Query 12405 CAGGTGAAACCAAGTTAATTGAAACTGGTTTGGCTATTCATCTGGACGATGTACATGTAG 12464 | |||||||| | | | | ||||||| ||||||| ||| | | |||| || | | Sbjct 43104 CGGGTGAAACTACGCTGCTGCCAACTGGTCTGGCTATCCATATTGGTGATGCTAATCTGG 43045 Query 12465 CTGCAATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGAACC 12524 | || ||||| | || || || ||||| ||||||||||| || || ||||| || || | Sbjct 43044 CGGCGGTGATTTTGCCGCGCTCCGGTCTGGGCCATAAACACGGCGTCGTGCTGGGCAATC 42985 Query 12525 TTACTGGTCTGATTGATTCAGATTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGCT 12584 | ||||| || || || ||||||||||| | || |||||| | ||||| ||| Sbjct 42984 TGGTCGGTCTTATCGACTCTGATTATCAGGGCCAGCTGATGGTATCGGTATGGAACCGCG 42925 Query 12585 CTACAGAGC-CTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCT 12643 | |||| | | |||| | || | || || || || ||||||||||||||| | || ||| Sbjct 42924 GT-CAGACCACATTTATTATTGAACCGGGCGAGCGCATTGCTCAGATGGTATTTGTCCCT 42866 Query 12644 GTAATGCAGCCTGAGTTCGTTGTAGTGGATTCATTTGAATCTACTGAACGTGGTGCTGGT 12703 || | ||| | || ||| | | ||||| ||||| | | |||||| || | || Sbjct 42865 GTGGTTCAGGCAGAATTCAATCTGGTGGAAGATTTTGACGCCAGTGAACGCGGCGAAGGG 42806 Query 12704 GGCTTT 12709 |||||| Sbjct 42805 GGCTTT 42800 >seq6760 Length=71796 Score = 96.9 bits (106), Expect = 2e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 68244 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 68303 ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 8719 TGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCCTTAGGCTGTACGAGTTCA 8778 Query 68304 AGTCTCGT 68311 |||||||| Sbjct 8779 AGTCTCGT 8786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231341761121270