Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021772.1
Length=72394
Score E
Sequences producing significant alignments: (Bits) Value
seq6488 141 4e-29
seq6760 96.9 2e-15
>seq6488
Length=277817
Score = 141 bits (156), Expect = 4e-29
Identities = 254/366 (69%), Gaps = 10/366 (3%)
Strand=Plus/Minus
Query 12349 AGGTTCTGCTGGTGTAGACTTACGCGCTAACACCTCTGAAC-CATTTG---AATTGAAAC 12404
||| ||||| ||| | || |||||||| |||| || ||| || || ||||||
Sbjct 43160 AGGGTCTGCGGGTCTGGATTTACGCGCCTG----TCTGGACGCATCTGTAGAACTGAAAC 43105
Query 12405 CAGGTGAAACCAAGTTAATTGAAACTGGTTTGGCTATTCATCTGGACGATGTACATGTAG 12464
| |||||||| | | | | ||||||| ||||||| ||| | | |||| || | |
Sbjct 43104 CGGGTGAAACTACGCTGCTGCCAACTGGTCTGGCTATCCATATTGGTGATGCTAATCTGG 43045
Query 12465 CTGCAATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACATGGTGTAGTGCTTGGGAACC 12524
| || ||||| | || || || ||||| ||||||||||| || || ||||| || || |
Sbjct 43044 CGGCGGTGATTTTGCCGCGCTCCGGTCTGGGCCATAAACACGGCGTCGTGCTGGGCAATC 42985
Query 12525 TTACTGGTCTGATTGATTCAGATTATCAGGGTGAACTTATGGTAAGCCTCTGGAATCGCT 12584
| ||||| || || || ||||||||||| | || |||||| | ||||| |||
Sbjct 42984 TGGTCGGTCTTATCGACTCTGATTATCAGGGCCAGCTGATGGTATCGGTATGGAACCGCG 42925
Query 12585 CTACAGAGC-CTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGTGCCT 12643
| |||| | | |||| | || | || || || || ||||||||||||||| | || |||
Sbjct 42924 GT-CAGACCACATTTATTATTGAACCGGGCGAGCGCATTGCTCAGATGGTATTTGTCCCT 42866
Query 12644 GTAATGCAGCCTGAGTTCGTTGTAGTGGATTCATTTGAATCTACTGAACGTGGTGCTGGT 12703
|| | ||| | || ||| | | ||||| ||||| | | |||||| || | ||
Sbjct 42865 GTGGTTCAGGCAGAATTCAATCTGGTGGAAGATTTTGACGCCAGTGAACGCGGCGAAGGG 42806
Query 12704 GGCTTT 12709
||||||
Sbjct 42805 GGCTTT 42800
>seq6760
Length=71796
Score = 96.9 bits (106), Expect = 2e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 68244 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 68303
||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 8719 TGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCCTTAGGCTGTACGAGTTCA 8778
Query 68304 AGTCTCGT 68311
||||||||
Sbjct 8779 AGTCTCGT 8786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 231341761121270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |