Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021782.1
Length=72098
Score E
Sequences producing significant alignments: (Bits) Value
seq6488 127 9e-25
seq6760 96.9 2e-15
seq725 82.4 4e-11
>seq6488
Length=277817
Score = 127 bits (140), Expect = 9e-25
Identities = 197/279 (71%), Gaps = 2/279 (1%)
Strand=Plus/Minus
Query 7954 GAATTGAAACCAGGTGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTCATCTGGATGAT 8013
||| ||||||| |||||||| | | | | ||||||| ||||||| ||| | | ||||
Sbjct 43114 GAACTGAAACCGGGTGAAACTACGCTGCTGCCAACTGGTCTGGCTATCCATATTGGTGAT 43055
Query 8014 GTGAAGTATGCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTG 8073
| || || || ||||| | || || || |||||||||||||| || || || |||
Sbjct 43054 GCTAATCTGGCGGCGGTGATTTTGCCGCGCTCCGGTCTGGGCCATAAACACGGCGTCGTG 42995
Query 8074 CTTGGGAACCTTACTGGTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTC 8133
|| || || || ||||| || || || || |||||||| | || |||||| |
Sbjct 42994 CTGGGCAATCTGGTCGGTCTTATCGACTCTGATTATCAGGGCCAGCTGATGGTATCGGTA 42935
Query 8134 TGGAATCGCTCTACAGAGC-CTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGT 8192
||||| ||| | |||| | | |||| | || | || || || || ||||||||||||||
Sbjct 42934 TGGAACCGCGGT-CAGACCACATTTATTATTGAACCGGGCGAGCGCATTGCTCAGATGGT 42876
Query 8193 AATCGTGCCTGTAATGCAGCCTGAGTTCGTTGTAGTGGA 8231
| | || ||||| | ||| | || ||| | | |||||
Sbjct 42875 ATTTGTCCCTGTGGTTCAGGCAGAATTCAATCTGGTGGA 42837
>seq6760
Length=71796
Score = 96.9 bits (106), Expect = 2e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 63172
||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 8719 TGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCCTTAGGCTGTACGAGTTCA 8778
Query 63173 AGTCTCGT 63180
||||||||
Sbjct 8779 AGTCTCGT 8786
>seq725
Length=236385
Score = 82.4 bits (90), Expect = 4e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090
||||||||||||||||||||||| ||||||||||| | |||||| ||||||| ||
Sbjct 175359 CCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAGCCCT 175418
Query 63091 GTAGGGTGTACCA 63103
|||||| ||||||
Sbjct 175419 GTAGGGCGTACCA 175431
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230395355740966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |