Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq6488 127 9e-25 seq6760 96.9 2e-15 seq725 82.4 4e-11 >seq6488 Length=277817 Score = 127 bits (140), Expect = 9e-25 Identities = 197/279 (71%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 7954 GAATTGAAACCAGGTGAAACCAAGTTAGTTGAAACTGGTTTGGCTATTCATCTGGATGAT 8013 ||| ||||||| |||||||| | | | | ||||||| ||||||| ||| | | |||| Sbjct 43114 GAACTGAAACCGGGTGAAACTACGCTGCTGCCAACTGGTCTGGCTATCCATATTGGTGAT 43055 Query 8014 GTGAAGTATGCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTG 8073 | || || || ||||| | || || || |||||||||||||| || || || ||| Sbjct 43054 GCTAATCTGGCGGCGGTGATTTTGCCGCGCTCCGGTCTGGGCCATAAACACGGCGTCGTG 42995 Query 8074 CTTGGGAACCTTACTGGTCTGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTC 8133 || || || || ||||| || || || || |||||||| | || |||||| | Sbjct 42994 CTGGGCAATCTGGTCGGTCTTATCGACTCTGATTATCAGGGCCAGCTGATGGTATCGGTA 42935 Query 8134 TGGAATCGCTCTACAGAGC-CTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGT 8192 ||||| ||| | |||| | | |||| | || | || || || || |||||||||||||| Sbjct 42934 TGGAACCGCGGT-CAGACCACATTTATTATTGAACCGGGCGAGCGCATTGCTCAGATGGT 42876 Query 8193 AATCGTGCCTGTAATGCAGCCTGAGTTCGTTGTAGTGGA 8231 | | || ||||| | ||| | || ||| | | ||||| Sbjct 42875 ATTTGTCCCTGTGGTTCAGGCAGAATTCAATCTGGTGGA 42837 >seq6760 Length=71796 Score = 96.9 bits (106), Expect = 2e-15 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 63113 TGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATAGCTGTACGAGTTCG 63172 ||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 8719 TGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCCTTAGGCTGTACGAGTTCA 8778 Query 63173 AGTCTCGT 63180 |||||||| Sbjct 8779 AGTCTCGT 8786 >seq725 Length=236385 Score = 82.4 bits (90), Expect = 4e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 63031 CCTTAGCTCAGTTGGATAGAGCAGTAGCCTTCTAAGCTATTGGTCACTGGTTCGAATCCA 63090 ||||||||||||||||||||||| ||||||||||| | |||||| ||||||| || Sbjct 175359 CCTTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTAGGTCACAGGTTCGAGCCCT 175418 Query 63091 GTAGGGTGTACCA 63103 |||||| |||||| Sbjct 175419 GTAGGGCGTACCA 175431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230395355740966