Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq6691 123 3e-22 seq742 89.7 6e-12 >seq6691 Length=42033 Score = 123 bits (136), Expect = 3e-22 Identities = 150/204 (74%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| |||||||| |||| | ||||||||||||||| ||||| Sbjct 14230 ACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCACGCTT 14289 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||||||||||| | |||||||| ||||| ||||| || || ||| || || Sbjct 14290 CTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGCAAGCGAA 14349 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | | ||||| | |||||| | | || || |||||||| || ||||| Sbjct 14350 GGCCACCACACGCTCCCCGAAGGTGGCCGTG---TCGCTGCCGATCCACTGCAGGGCCCA 14406 Query 869359 GTCGGCCTTTTTCCTCACCGACGG 869382 ||| ||||| ||| |||| |||| Sbjct 14407 GTCTGCCTTCTTCTTCACACACGG 14430 >seq742 Length=196864 Score = 89.7 bits (98), Expect = 6e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 |||||| || ||||| ||||||| || | || || |||||||| || | || ||||| Sbjct 47527 CTGGTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGA 47468 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || ||||| | ||||| || ||| || | ||| | || ||| Sbjct 47467 GACTCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATGCAGTGTACATGAAGGCC 47408 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || || |||||||| | || || ||||| || || ||||||||||| || || Sbjct 47407 GATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTC 47348 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGA 1630283 || || | ||||| ||| || ||||| || || Sbjct 47347 AATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGA 47309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6101490359610378