Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 123 3e-22
seq742 89.7 6e-12
>seq6691
Length=42033
Score = 123 bits (136), Expect = 3e-22
Identities = 150/204 (74%), Gaps = 3/204 (1%)
Strand=Plus/Plus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||| ||||| || ||||| |||||||| |||| | ||||||||||||||| |||||
Sbjct 14230 ACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCACGCTT 14289
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||| ||||||||||||| | |||||||| ||||| ||||| || || ||| || ||
Sbjct 14290 CTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGCAAGCGAA 14349
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358
| | | | ||||| | |||||| | | || || |||||||| || |||||
Sbjct 14350 GGCCACCACACGCTCCCCGAAGGTGGCCGTG---TCGCTGCCGATCCACTGCAGGGCCCA 14406
Query 869359 GTCGGCCTTTTTCCTCACCGACGG 869382
||| ||||| ||| |||| ||||
Sbjct 14407 GTCTGCCTTCTTCTTCACACACGG 14430
>seq742
Length=196864
Score = 89.7 bits (98), Expect = 6e-12
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
|||||| || ||||| ||||||| || | || || |||||||| || | || |||||
Sbjct 47527 CTGGTCTACATAGCGGGCCGTGTTATTGTACACACGCAGCATGGGGACCAACCCATTGGA 47468
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| ||||| || ||||| | ||||| || ||| || | ||| | || |||
Sbjct 47467 GACTCCGTTAGTACCCGCGATGTAGGAACCCTTGGCTCGGATGCAGTGTACATGAAGGCC 47408
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
||| || || || |||||||| | || || ||||| || || ||||||||||| || ||
Sbjct 47407 GATACCTCCAGCAGACTTGGAAACCAGGGCACACTGCTTCAGGGTGTCGTAGATCCCTTC 47348
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGA 1630283
|| || | ||||| ||| || ||||| || ||
Sbjct 47347 AATACTATCATCGCTCATGGCCAGTAGGAAGCAAGAAGA 47309
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6101490359610378
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |