Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq223 233 2e-56
seq18382 120 3e-22
>seq223
Length=511576
Score = 233 bits (258), Expect = 2e-56
Identities = 359/512 (70%), Gaps = 0/512 (0%)
Strand=Plus/Minus
Query 28796 CAAGACCGTCGCTGCGTATTTTGTGGAATGGAGCGTGTACGGCCGCAACTTTTCGGTGGA 28855
|||| ||| | || |||||||| || ||| ||||||| || ||| || || |||||
Sbjct 113983 CAAGGTCGTTGGCGCATATTTTGTTGAGTGGGGCGTGTATGGTCGCGGATTCTCCGTGGA 113924
Query 28856 CAAGGTGCCGCTGCCCAACCTCTCGCATCTGTTATACGGCTTCGTACCTATTTGCGGCGG 28915
|| | || || ||||| | ||| | || ||||||||| || |||||||||||
Sbjct 113923 TAAAATCCCTGCGCAGAACCTGACACATATCTTGTACGGCTTCACGCCGATTTGCGGCGG 113864
Query 28916 CGACGGGCTCAACGACGCCCTTAAAACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTC 28975
|||||| | |||||| | |||| ||| || |||||| | || ||||||| |
Sbjct 113863 GGACGGGATTAACGACAGTTTAAAAAGCATTGAGGGCAGTTTTCAGGCCTTGCAACGCGC 113804
Query 28976 GTGCAACGGCCGTTCAGATTTTAAAGTTGCTATTCACGATCCTTGGGCCGCAATACAAAA 29035
|| || ||| |||||||||||||| || |||||||| ||||| || | || |
Sbjct 113803 CTGTGCGGGGCGTCAGGATTTTAAAGTTGCGATACACGATCCCTGGGCTGCGGTGCAGAT 113744
Query 29036 ACCGCAAAAGGGCGTGTCTGCGTGGAACGAGCCCTACAAAGGCAATTTCGGTCAGCTCAT 29095
|| || | ||||| || | | || || ||||| ||||| |||||||| ||
Sbjct 113743 GCCTCAGCAAGGCGTCAGTGAATATTCAGCACCTTATAAAGGTAATTTTGGTCAGCTGAT 113684
Query 29096 GGCTGCCAAGTTGGCCAATCCACACATCAAAATTCTACCGTCCATAGGCGGCTGGACATT 29155
||| || ||| ||||| || | |||||| | || ||||| || |||||||| ||
Sbjct 113683 GGCGCTGAAAAAAGCCTATCCAAACCTGAAAATTGTCCCTTCCATCGGTGGCTGGACGTT 113624
Query 29156 GTCCGACCCTTTTTATTTTATGCACGACGCGGAGAAACGGCGCGTGTTTGTGGACTCGGT 29215
||| ||||| || ||||| ||| | || || ||| ||| ||| || || | ||||||
Sbjct 113623 GTCAGACCCGTTCTATTTCATGAAGGATAAGGCGAAGCGGGACGTCTTCGTAGCCTCGGT 113564
Query 29216 CGAGGAATTTTTGCAGGTGTGGAAATTTTTTGACGGCGTAGACATTGACTGGGAATTTCC 29275
| ||||| |||| ||||| || |||||||| || || |||||||||||||||||
Sbjct 113563 AAAAGAATTCCTGCAAACCTGGAAGTTCTTTGACGGTGTGGATATTGACTGGGAATTTCC 113504
Query 29276 GGGCGGTAAAGGCGCTAACCCGACACTTGGCA 29307
||||||| || | |||||| | || ||||
Sbjct 113503 GGGCGGTGGCGGTGAAAACCCGGCGCTGGGCA 113472
>seq18382
Length=19407
Score = 120 bits (132), Expect = 3e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263
|| || || ||||| ||||||||||| ||||| || ||||| || | ||||| |
Sbjct 13710 GGTGGATTCTTCAGGATGAAGGTGTTCAGCTTGTGATTGAAGTCCAGAGCCCCGTGGAAG 13769
Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTC 34323
||||| || |||||||||||| |||| | ||| || ||| || | ||||| |||
Sbjct 13770 CCGCAAGCCTTGCAGCCCTGAGAGATGTTCCCCTTCTTGGCGCTGACCAGCAGCTCTGTC 13829
Query 34324 TCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367
|||||||||||||| || || |||| ||||||||||||||| ||
Sbjct 13830 TCCGGGTTGTCACACTCGGGGCACAGCACAAACTTGCGGATAAA 13873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412495261247162
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |