Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq270 84.2 4e-11 seq35 84.2 4e-11 >seq270 Length=179301 Score = 84.2 bits (92), Expect = 4e-11 Identities = 60/68 (88%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 122770 ACGTTAGCTCAGTTGGTTAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCC 122829 || |||||||||||| ||||||||| || | | |||||| |||||||||||||||||||| Sbjct 57380 ACCTTAGCTCAGTTG-TTAGAGCATTTGCCATGTAATCAAAGGGTCCTGGGTTCGAGTCC 57322 Query 122830 CAGACGTC 122837 |||| ||| Sbjct 57321 CAGAGGTC 57314 >seq35 Length=455554 Score = 84.2 bits (92), Expect = 4e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 120227 TGCCGGTATAGCTCAGCTGGTAGAGCAACTGACTTGTAATCAGTAGGTCTCGGGTTCGAT 120286 ||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||| Sbjct 252410 TGCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGAT 252469 Query 120287 CCCTGATGCCGGCACCATATTCT 120309 || | | ||||||||| |||| Sbjct 252470 TCCGGTAGTCGGCACCAT-TTCT 252491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825206160537360