Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq6691 122 1e-21
seq8431 86.0 1e-10
seq4605 86.0 1e-10
>seq6691
Length=42033
Score = 122 bits (134), Expect = 1e-21
Identities = 146/198 (74%), Gaps = 3/198 (2%)
Strand=Plus/Plus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| || |||||| |||||||| ||| | ||||||||||||||| |||||
Sbjct 14230 ACCCTCGTCTCGGGAGATCAACTCGTTGCTGAAGGTCAAGCCGGGCATGAGGCCACGCTT 14289
Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459
||| ||||||||||||| |||||||| ||||| ||||| || || ||| || ||
Sbjct 14290 CTTCAGCCAAAAGATGGAGGCAAAACTGCCGGAGAAGAAGATTCCTTCTACGCAAGCGAA 14349
Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519
| | || | ||||| | || ||| || | || || |||||||| || |||||
Sbjct 14350 GGCCACCACACGCTCCCCGAAGGTGGCCGTG---TCGCTGCCGATCCACTGCAGGGCCCA 14406
Query 794520 CTCTGCCTTTTTCCTCAC 794537
|||||||| ||| ||||
Sbjct 14407 GTCTGCCTTCTTCTTCAC 14424
Score = 100 bits (110), Expect = 4e-15
Identities = 155/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984
|||||| |||||||||||||| || || ||||||| ||||| | ||| |||||
Sbjct 13942 CTCGAAGAAGTTGGTCTTGCCTTCCAGGGAGATCATGTCCATGAAGCTGAAGGGGTTCTT 14001
Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAG--CGACGCAAGCAGGCGGTCGGCGACGAATTCA 794042
| ||||||||| | || || || | || |||| || |||||||| || ||||||
Sbjct 14002 GGATCCGTAGTGCTTGGCACAGCCCAGGTCCAC-CAAG-AGCCGGTCGGCCACAAATTCA 14059
Query 794043 ATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTG 794102
|| ||||| |||| ||| || ||||||||| | || |||||||| | ||| ||
Sbjct 14060 ATATACTGCGACATCAGGTCGCAGTTCATGCCCAGTAGTCTGACGGGCAGGGCGTCGGTG 14119
Query 794103 ACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGAT 794140
| |||||||| || || ||| || || ||| |||
Sbjct 14120 AGAAACTCTTGTTCAATGATGACAGCATCCTTGACGAT 14157
>seq8431
Length=66997
Score = 86.0 bits (94), Expect = 1e-10
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843
|||||||||||||||||||| ||||| | || ||||| | ||||||||||||| |||
Sbjct 37501 GCCTCGGTGGCGCAGTTGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCAATC 37442
Query 1812844 CTCACCCGAGGTATATC 1812860
|||||||| || |||||
Sbjct 37441 CTCACCCGGGGCATATC 37425
>seq4605
Length=58853
Score = 86.0 bits (94), Expect = 1e-10
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 1812784 GCCTCGGTGGCGCAGTTGGCGGCGCGCCAATCCCATAAATTGGAGGTCGTGAGTTCGATC 1812843
|||||||||||||||||||| ||||| | || ||||| | ||||||||||||| |||
Sbjct 22700 GCCTCGGTGGCGCAGTTGGCAGCGCGTAAGTCTCATAATCTTAAGGTCGTGAGTTCAATC 22641
Query 1812844 CTCACCCGAGGTATATC 1812860
|||||||| || |||||
Sbjct 22640 CTCACCCGGGGCATATC 22624
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7908924213468126
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |