Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq4062 143 2e-29
seq8521 129 4e-25
seq48539 114 8e-21
seq223 109 4e-19
seq15643 107 1e-18
seq8056 95.1 8e-15
>seq4062
Length=67394
Score = 143 bits (158), Expect = 2e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 34762 CCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTC 34821
|||||| |||||||| | |||| ||||||||| ||||| |||||||| || | | |
Sbjct 48379 CCTCAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCTGCC 48320
Query 34822 ATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTT 34881
||| ||||| ||||| |||||||||||||| | ||||||||| | || | || |||||
Sbjct 48319 ATCTTCCAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCTGGGGGGATTCCTTCCTT 48260
Query 34882 GTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTAT 34941
|| | || || ||||| | | || | ||| | ||| || || | ||| ||
Sbjct 48259 ATCTTGGATCTTGGCCTTGACATGTTCGATGGTGTCAGAAGGCTCCACCTCGAGGGTGAT 48200
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGAT 34980
||||| |||||||||||||| || ||||||||||||||
Sbjct 48199 AGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGAT 48161
>seq8521
Length=40141
Score = 129 bits (142), Expect = 4e-25
Identities = 158/214 (74%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||||||||||||||||||||| || ||| | || ||||
Sbjct 2230 AGGACCAAGTGAAGAGTGGACTCCTTCTGAATGTTATAGTCAGAGAGGGTACGTCCATCT 2171
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| ||||||||||||||||||| | ||||| ||| | || | || ||||| ||
Sbjct 2170 TCCAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCC 2111
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||| || || || || | ||| || ||| || || | ||| || |
Sbjct 2110 TGGATCTTGGCTTTCAC--ATTCTCAATTGTGTCAGAGGGCTCAACCTCTAGGGTGATTG 2053
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || |||||||| || || ||||||||
Sbjct 2052 TCTTGCCGGTAAGGGTCTTCACGAAAATCTGCAT 2019
Score = 105 bits (116), Expect = 4e-18
Identities = 153/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| ||| || || ||||| ||||| || ||| | || ||||
Sbjct 2914 AGGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGAAAGGGTACGTCCATCT 2855
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||||||| || ||||||| | ||||| ||| | || | || ||||| ||
Sbjct 2854 TCCAATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTATCC 2795
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || ||| || || || || | || || ||| || || | ||| ||||
Sbjct 2794 TGGATCTTGGCTTTCAC--ATTCTCAATTGTGTCTGAGGGCTCAACCTCTAGGGTGATGG 2737
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || ||||| || ||||||||||||||
Sbjct 2736 TCTTCCCGGTCAGGGTTTTGACAAAGATCTGCAT 2703
Score = 98.7 bits (108), Expect = 6e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| ||||| ||||| ||||| || ||| | || |||| ||||| ||||||||||||||
Sbjct 2666 CTCTTTCTGGATGTTGTAGTCAGAAAGGGTACGTCCATCTTCCAGCTGCTTTCCGGCGAA 2607
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| | ||||| ||| | || | || |||||||| | || || || ||
Sbjct 2606 GATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGTCTTGGATCTTGGCCTTAACATT 2547
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
|||| | || || ||| || || | ||| || ||||| || || || ||||| ||
Sbjct 2546 CTCTATGGTGTCGGAGGGCTCAACCTCGAGGGTGATTGTCTTCCCAGTCAGAGTCTTGAC 2487
Query 34966 AAAGATCTGCAT 34977
|||||||||||
Sbjct 2486 GAAGATCTGCAT 2475
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| ||||||||| ||||| ||||| || || |||| ||||
Sbjct 2458 AGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGGCCATCT 2399
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||||||||| ||||||| | ||||| ||| | || | || ||||||||
Sbjct 2398 TCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGGGGGATACCTTCCTTGTCC 2339
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| ||||| ||||| || || || || || || || || | || ||||
Sbjct 2338 TGGATTTTGGCCTTGAC--ATTCTCAATACTGTCCGAGGGTTCAACCTCCAGTGTAATGG 2281
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||| || || | ||||| ||||||||||||||
Sbjct 2280 TCTTGCCGGTCAAAGTCTTGACAAAGATCTGCAT 2247
Score = 84.2 bits (92), Expect = 1e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| |||||||||||||| ||||| || ||| | || ||||
Sbjct 2002 AGGACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGACCATCT 1943
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| |||||||| || || ||||||| | ||||| ||| | || | || ||||||||
Sbjct 1942 TCAAGTTGCTTACCAGCAAAGATCAACCTCTGCTGATCTGGGGGAATACCTTCCTTGTC 1884
>seq48539
Length=7100
Score = 114 bits (126), Expect = 8e-21
Identities = 153/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| ||| || || || || || ||||| || ||| |||| ||||
Sbjct 6698 AGGACCAAGTGAAGGGTAGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCC 6639
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| |||||||| |||||||||| | ||||| ||| | || | || ||||||||
Sbjct 6638 TCCAACTGCTTTCCTGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCCTTGTCT 6579
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | | || | ||| | ||| || || | || || |||
Sbjct 6578 TGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGGCTCAACTTCTAGAGTAATAGTC 6519
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
||||| || ||||||||||| ||||||||||||
Sbjct 6518 TTTCCGGTAAGGGTCTTTACGAAGATCTGCATG 6486
>seq223
Length=511576
Score = 109 bits (120), Expect = 4e-19
Identities = 321/490 (66%), Gaps = 16/490 (3%)
Strand=Plus/Plus
Query 6046 CCACCCGGAAACTCCCAGTCGATGTCCACTCCGTCAAAGAACTTCCAGGTCTCCAGAAAC 6105
|| |||||||| |||||||| || ||||| |||||||||||||||||||| | ||| ||
Sbjct 113498 CCGCCCGGAAATTCCCAGTCAATATCCACACCGTCAAAGAACTTCCAGGTTTGCAGGAAT 113557
Query 6106 TC----GCGGACGCTTGTGACGAACACCTCACGCTTAGAGTCATCGTTCATGAAATAAAA 6161
|| | || ||| ||||| || || ||||| | | ||| ||||||||||| ||
Sbjct 113558 TCTTTTACCGAGGCT----ACGAAGACGTCCCGCTTCGCCTTATCCTTCATGAAATAGAA 113613
Query 6162 CGGATCGCTCAACGTCCACCCCCCTATGGATGGTAGGACCGTCAACGAGGGGTTGTGACG 6221
||| || ||||||||| || || ||||| || | | ||| || | |
Sbjct 113614 CGGGTCTGACAACGTCCAGCCACCGATGGAAGGGACAATTTTCAGGTTTGGATAGGCTTT 113673
Query 6222 TTTGATGGCCATCAGCTGGCCAAAGTTACCCTTGTACTCTTCGTTGTACGCCTCAACACC 6281
||| | ||||||||||| ||||| ||||| || || | | || | || ||
Sbjct 113674 TTTCAGCGCCATCAGCTGACCAAAATTACCTTTATAAGGTGCTGAATATTCACTGACGCC 113733
Query 6282 TTTCTGTGGTTTTTGCAACGCGGCCCAGATGTCGTGAATACTTACCTTGAAGTCATCGCG 6341
|| ||| || | |||| ||| |||||| ||||| || || || || || | ||
Sbjct 113734 TTGCTGAGGCATCTGCACCGCAGCCCAGGGATCGTGTATCGCAACTTTAAAATCCTGACG 113793
Query 6342 ACCAGCGCAGGATTTCTGTAGCGCCTCAAAGGAATTG---GGAATCTGCTTGAGGGCGTC 6398
|| || |||| || | |||| || || || ||| || | |||
Sbjct 113794 CCCCGCACAGGCGCGTTGCAAGGCCTGAA---AACTGCCCTCAATGCTTTTTAAACTGTC 113850
Query 6399 GTTTATGCCGCTACCACCACAAATTGGAATGAACCCGTACAGCAGGTGCGTCAGATTAGG 6458
||| || ||| || || ||||| || |||| ||||||| | || ||||| || |
Sbjct 113851 GTTAATCCCGTCCCCGCCGCAAATCGGCGTGAAGCCGTACAAGATATGTGTCAGGTTCTG 113910
Query 6459 TATTGGTACCTTGTCAATGG-GAAACTGTCTGCCATACACTCCCCACTCCACGAAATACG 6517
|| | || || | || ||| | | | |||||||| |||||||| || ||||| |
Sbjct 113911 CGCAGGGATTTTATCCACGGAGAATCCG-CGACCATACACGCCCCACTCAACAAAATATG 113969
Query 6518 CACCGACGAC 6527
| || |||||
Sbjct 113970 CGCCAACGAC 113979
>seq15643
Length=27379
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| || | ||||| ||| ||||||||| || || || || || ||| | || ||||
Sbjct 12258 AGCACTAAGTGAAGTGTGGACTCCTTCTGGATATTGTAATCTGAAAGGGTACGTCCATCC 12199
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || || |||||||||||||||| | ||||| ||| | || | || || |||||
Sbjct 12198 TCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGGGATTCCTTCTTTGTCT 12139
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | | || | ||| || ||| || |||| ||| |||||
Sbjct 12138 TGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAGGGCTCTACCTCAAGGGTGATGGTT 12079
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||||| |||||||| || || ||||||||
Sbjct 12078 TTCCCCGTAAGGGTCTTCACGAAAATCTGCAT 12047
>seq8056
Length=34938
Score = 95.1 bits (104), Expect = 8e-15
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|| || |||| ||| || ||||||||||| ||||| || ||| | || |||| |||
Sbjct 32339 ACAAGATGAAGGGTAGATTCTTTCTGAATGTTGTAGTCGGAGAGGGTACGTCCATCTTCC 32280
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| ||||| || ||||| |||| | ||||| ||| | || | || ||||| || |
Sbjct 32279 AGCTGCTTGCCAGCGAAAATCAACCTCTGCTGATCTGGGGGGATGCCTTCCTTATCTTGA 32220
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
||||| |||||| | | || | || || ||||| || | ||| || |||||
Sbjct 32219 ATTTTGGCCTTGACGTTTTCAATAGTATCTGAGGGTTCGACCTCCAGGGTGATTGTCTTG 32160
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| || | ||||| || ||||||||||||
Sbjct 32159 CCAGTTAATGTCTTGACGAAGATCTGCATG 32130
Score = 82.4 bits (90), Expect = 5e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| || || || || || ||| |||| |||| || | ||| ||||| |||||
Sbjct 32094 CTCCTTCTGGATATTGTAATCGGAAAGGGTGCGACCATCTTCTAATTGTTTTCCAGCGAA 32035
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| || ||||| || || | || | || || ||||| | ||||| || ||
Sbjct 32034 GATAAGACGTTGTTGATCCGGAGGAATTCCTTCTTTGTCTTGAATTTTCGCCTTTACATT 31975
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965
| | |||| || || ||| || || | || || |||||||| || | || || ||
Sbjct 31974 TTCGATCGTATCTGAGGGCTCAACCTCCAATGTGATCGTCTTTCCGGTCAAAGTTTTCAC 31915
Query 34966 AAAGATCTGCATGAT 34980
|| |||||||||||
Sbjct 31914 GAAAATCTGCATGAT 31900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325419571628246
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