Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_022749.1
Length=39758
Score E
Sequences producing significant alignments: (Bits) Value
seq11088 646 0.0
seq6760 306 9e-79
seq25848 179 9e-41
seq725 178 3e-40
seq19589 102 2e-17
>seq11088
Length=48063
Score = 646 bits (716), Expect = 0.0
Identities = 444/501 (89%), Gaps = 0/501 (0%)
Strand=Plus/Plus
Query 18570 ATGAATCGCCACAGATAATCTAGACACTTCCGAGCCGCTGATAATATTGGTTTTCGTATT 18629
|||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||
Sbjct 18553 ATGAATCGCCACGCATAATCTAGACACTTCCGAGCCGTTGATAATACTGGTTTTCATATT 18612
Query 18630 CAGTTGGTGGCATATGATCACTCGAACCATGCCGACGCTTACTGTTATAAAACATTTCGA 18689
| || |||| ||| ||||| || || |||||||||||| |||||||||||||||||||||
Sbjct 18613 CTGTCGGTGACATCTGATCGCTAGAGCCATGCCGACGCCTACTGTTATAAAACATTTCGA 18672
Query 18690 TGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAGATCTTTTTCTTTATCC 18749
|||||||||||||||| | ||| |||||||| ||||||||||||| ||||||||||||||
Sbjct 18673 TGTAATCAAAAATATCGCTGCGGGCTTCTTCCCGCGTTCCGTAGACCTTTTTCTTTATCC 18732
Query 18750 GTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTGTCATGACAGTTACCGC 18809
| || |||||||||| ||||||||| |||||||| || || || || || ||||||||||
Sbjct 18733 GCTCGCGTTTCAGTAACTGGAAAAAGCTTTCTGCAACCGCATTATCGTGGCAGTTACCGC 18792
Query 18810 GACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGACTGCCACTCATAGCTTG 18869
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct 18793 GACGACTCATGCTGCCCTCCAGGCCGTGTGATTTCAGGAACGACTGCCACTCATGGCTTG 18852
Query 18870 TGTACTGACTGCCTTGATCAGAATGAACCAGCACCTGCTTTTGAGGATTACGTCGCCACA 18929
||||||||||||| |||| || |||||||||||||| ||||| || ||||| ||||| |
Sbjct 18853 TGTACTGACTGCCCGGATCCGAGTGAACCAGCACCTGTTTTTGGGGGTTACGCCGCCATA 18912
Query 18930 CGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCCGGGGCTGCATTGACCAGC 18989
| |||||||| ||||| ||||||||||| |||||||||||||||| | ||||||| |||
Sbjct 18913 CAGCCATCAGCAGTGCGTTCAGGACAATGTCCTTTGTCATCCGGGATTACATTGACTAGC 18972
Query 18990 CAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGATACAGCCAGCCTTCGTGAG 19049
| |||| |||||| |||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct 18973 CGATAATTTTGCGTGAGAACAGATCAACAACCACGGCAAGATACAGCCAGCCTTCGTGAG 19032
Query 19050 TCCGGATGTAGGTGATGTCCG 19070
||| ||||||||| |||||||
Sbjct 19033 TCCTGATGTAGGTTATGTCCG 19053
Score = 282 bits (312), Expect = 1e-71
Identities = 207/241 (86%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 19081 CTCATCCGGTGCTTCCGAGTTGAACTGCCGCTGGAGCCTGTTGGGCGTCACGATGCTGGT 19140
||||||||| ||||||| |||||||| ||||||||||||||||||| |||||| ||||
Sbjct 15806 CTCATCCGGAGCTTCCGGATTGAACTGTCGCTGGAGCCTGTTGGGCGACACGATACTGGC 15865
Query 19141 TTCACCCTTACGTGCCCGTGGGCTACGGTACCCGACCTGAGCCCTTATCCCGGCACGCTT 19200
|| || ||||||||||| ||||| ||||| |||||||||||| ||||||||||||| ||
Sbjct 15866 CTCGCCTTTACGTGCCCGCGGGCTCCGGTATCCGACCTGAGCCTTTATCCCGGCACGTTT 15925
Query 19201 CATCAGTCGCCAGACACGGTTAACTCCGCACTGTTGTCCGGTATCCCGCAGGTCGAGGTG 19260
||||||||| ||||| | ||| |||||||||||||| ||| |||||||||| | || ||
Sbjct 15926 CATCAGTCGTCAGACTCTGTTGACTCCGCACTGTTGCCCGCTATCCCGCAGATTCAGATG 15985
Query 19261 GATCTTGCGATAACCATAAACGCAACCCGACTCCAGCCAGAACTGCTTTATCAGCCCCGT 19320
|||||||||||||||||| || || ||||| |||||||||||||| || ||| | || ||
Sbjct 15986 GATCTTGCGATAACCATAGACACATCCCGATTCCAGCCAGAACTGTTTAATCTGTCCTGT 16045
Query 19321 C 19321
|
Sbjct 16046 C 16046
>seq6760
Length=71796
Score = 306 bits (338), Expect = 9e-79
Identities = 364/494 (74%), Gaps = 0/494 (0%)
Strand=Plus/Plus
Query 21745 CGAGGTCTCTGTTTAACTTCGGTATAAATCCGGCCAATGTACTCGCCCAAAACTCCGATA 21804
|| ||||| ||||| ||| ||||||||| || |||||||| || | || || |||
Sbjct 16328 CGTGGTCTTTGTTTGGTCTCGATATAAATCCTTCCGATGTACTCACCTAGCACGCCAATA 16387
Query 21805 CCAATGAGCTGCACACCACCGAGAAAAAGTATTGATACCAGCAATGATGGATAACCGCGC 21864
|| || ||||| | |||||||| ||||| || || |||| | || |||||||| |
Sbjct 16388 CCTATTAGCTGGATTCCACCGAGGAAAAGAATAGAAACCAAGATAGACGGATAACCATGA 16447
Query 21865 ACAGGATTCCCGAATGCAAGCGTATCAATGATCATCCAGGCACCGTACAGGAAAGCCAGG 21924
|| || || || || || || ||||| ||||| | ||||||| ||||| |||
Sbjct 16448 ACGGGGTTGCCAAAAATGAGGGTGTCAATAATCATATATACACCGTAGGCGAAAGACAGA 16507
Query 21925 CCTGCAACGAACAGGCCAATGTACGTCCACATGCGTAACGGAAATGTTGAGAAGCTGGTA 21984
|| || || || || || || ||||||||||| || | ||||| |||||||| ||
Sbjct 16508 CCGGCCACAAAAAGACCTATATACGTCCACATTCGCAGTGGAAAAGTTGAGAACGATGTT 16567
Query 21985 ATCCCTTCAAGCGCCAGGTTCCAGAGCTTCCAGCCATTAAACTTAGTGCTGCCAGCAACA 22044
|| ||||| || || |||||||| || ||||| |||||||| || || || |||||
Sbjct 16568 ATGCCTTCGAGAGCAAGGTTCCACAGTTTCCAACCATTAAATTTTGTCGAACCGGCAACG 16627
Query 22045 CGCTCAGCGCGAGCATATTCAACAACATCTGTACTCCCACCAACCCAGCTCAATACTCCT 22104
|| ||| | || | |||||| ||||| || || | ||||| ||||| || || |||
Sbjct 16628 CGTTCATCTCGGGTATATTCGACAACTTCAGTGCGACCACCGACCCAAGACAGAACCCCT 16687
Query 22105 TTCATGAACAGGTTGCGTTCTGGTAATAATTTAATGTTTTCCACAACTCCGCGAGACATT 22164
|||||||| | ||| ||||| || | || ||||||||||| || || |||||||||||
Sbjct 16688 TTCATGAATAAGTTTCGTTCAGGGAGCAACTTAATGTTTTCTACGACAGCGCGAGACATT 16747
Query 22165 AGTCGGAAATCGCCGACGTTCTCCTCAATCTTTGGATTGCTTATTTTATTGTGAAGTTTA 22224
| | ||||||||| ||||| ||||||||||| || ||||| || | || || || |||
Sbjct 16748 AACCTGAAATCGCCAACGTTTTCCTCAATCTTAGGCTTGCTGATCATGTTATGGAGCTTA 16807
Query 22225 TAGAACCACTCAGC 22238
|| |||||||||||
Sbjct 16808 TAAAACCACTCAGC 16821
>seq25848
Length=116905
Score = 179 bits (198), Expect = 9e-41
Identities = 287/410 (70%), Gaps = 4/410 (1%)
Strand=Plus/Plus
Query 18674 TTATAAAACATTTCGATGTAATCAAAAATATCACCGCGAGCTTCTTCTCGCGTTCCGTAG 18733
||||||||||| |||| ||||| || ||||| | || |||| | || |||
Sbjct 82883 TTATAAAACATCTCGACATAATCGAAGATATCCGCCTTCACTCCTTCCCTATTTTTATAG 82942
Query 18734 ATCTTTTTCTTTATCCGTTCACGTTTCAGTAGCTGGAAAAAACTTTCTGCGACTGCGTTG 18793
||| ||| ||||| ||||| ||||| || | ||||||||| ||||| || |||||||||
Sbjct 82943 ATCCGTTTATTTATGCGTTCCCGTTTTAGCAACTGGAAAAAGCTTTCCGCTACTGCGTTG 83002
Query 18794 TCATGACAGTTACCGCGACGGCTCATACTGCCCTCCAGCCCGTGTGATTTCAGGAACGAC 18853
||||| || ||||| ||||| ||||| |||| | | ||| | | ||| || |
Sbjct 83003 TCATGGCAATTACCCCGACGACTCATGCTGCTTTTTAAATTGTGAGCTGTCATAAAATTC 83062
Query 18854 TGCCACTCATAGCTTGTGTACTGACTGCCTTGATCAGAATGAACCAGCAC--CTGCTTTT 18911
|| || ||||| || || ||| ||| ||||| ||||| | | || |||| ||
Sbjct 83063 TGACATCTTTAGCTCGTATATTGAGAGCCCTGATCTGAATGGATTAATACTTCTGCCGTT 83122
Query 18912 GAGGATTACGTCGCCACACGGCCATCAGAAGTGCATTCAGGACAATATCCTTTGTCATCC 18971
|| ||||||||||| || ||||||| | ||||| || || | || ||||| |
Sbjct 83123 --GGTTTACGTCGCCATACCGCCATCAATAATGCATCCATTACTAACTCAGCGGTCATTC 83180
Query 18972 GGGGCTGCATTGACCAGCCAATAACTTTGCGCGAGAACAGGTCAACAACCACAGCCAGAT 19031
| ||| |||||| ||||| |||| ||||| || |||| ||| ||||||||||
Sbjct 83181 GTCCGCCCATGCTCCAGCCGATAACCCTGCGTGAGAAGAGATCAAGAACAACAGCCAGAT 83240
Query 19032 ACAGCCAGCCTTCGTGAGTCCGGATGTAGGTGATGTCCGTTACCCAACGC 19081
||||||| || || || |||| || || || || || | |||||| ||
Sbjct 83241 ACAGCCAACCCTCATGCGTCCTTATATAAGTCATATCACTAACCCAATGC 83290
>seq725
Length=236385
Score = 178 bits (196), Expect = 3e-40
Identities = 486/731 (66%), Gaps = 25/731 (3%)
Strand=Plus/Plus
Query 23827 GACATTCATCAATCAGCCTTTGTGCTTCATGGGGCTCCAGCCAGCGGATCCGTTTATTCT 23886
|||||||||||| ||| | ||| ||||||| || || ||||| | || || ||||| |
Sbjct 173925 GACATTCATCAACCAGGCGTTGCGCTTCATTTGGTTCGAGCCATCTGACGCGCTTATTTT 173984
Query 23887 TTGGTTGAGGCACTTTAATAATTGGTGCCTTATCCAGCATTTTCCATTCACGCTCTGCGG 23946
||| || || ||||| || | ||| || || |||||| |||||| || || |||||||
Sbjct 173985 TTGCCTGTGGGACTTTTATCACTGGCGCTTTCTCCAGCCATTTCCAATCTCGTTCTGCGG 174044
Query 23947 CTCTTAGTAGGGCCTTTATAAATGAAAGATGCGTAGCCTTCGTTGCAACGGACGCTGG-- 24004
| | || || | ||| || | | || || | ||||| || || | |||
Sbjct 174045 CGCGCAGCAGCGACTTCATCAGGGCGAGGTGTTTTGCCTTGGTGGCTGTG----CTGACC 174100
Query 24005 TTTTGGCGTGTATTCT--GGAACAGGTTTCCCtttttttCTGCATGCTTCTGCCCTGAGT 24062
|| ||||| || || || | ||||| | || | || | ||| ||| |
Sbjct 174101 TTCTGGCGCTCATACTTTGGCGCTTCGATCCCTCTCTT-CGCCAAGGA-CTG---TGAAT 174155
Query 24063 TT---CCA--GTTTTCCTCATGACGCCGGTTCGTCATTTT-CTGCATTGCTGAATAAATT 24116
| | ||||||| | || ||||| |||||| ||| || || | || |||
Sbjct 174156 GCAACCGATGGTTTTCCGCTGCCCGGCGGTTAACCATTTTGCTG-ATCGCCGTGTAGATT 174214
Query 24117 TTTGATTCAGTAATGTCTCTTAGTTGCATTCCTGCGAAATGTTGAAGCCAGAATCCGATC 24176
|| | ||| ||||| || | | | || ||| | ||||| ||||||||||| |||
Sbjct 174215 TTGGCTTCGGTAATATCCTTCAACTTCACCCCTTCAAAATGCATCAGCCAGAATCCCATC 174274
Query 24177 CGGCTTTTGTCATCGTCCAGTGATTTTTTATGTGCTTTCTCTTCAAGCCACCTGACACAC 24236
|||||||||||||| ||||| ||||| || | || ||||| | |||||| | |||
Sbjct 174275 CGGCTTTTGTCATCATCCAGAGATTTCTTCTCAGCCCGTTCTTCCAACCACCTTAAACAG 174334
Query 24237 GCTTCCTCGAACGTTATATCAGGTATTTCACCAAGTTTGCTGACCCGCCATGCTTCAGCC 24296
|| || || || || | ||||| | || || || | | ||||| || |
Sbjct 174335 GCCTCTTCAAAAGTGACGTCAGGAAAATCGCCCAGCCGGTCTATTCGCCAGAGCTCTGAT 174394
Query 24297 TTTAGCTTGTCATGGAG-TTCTGTCGCCTGCCTTTTGTCCTTTGTTCCAAGAGACTGTTT 24355
||| ||||| || || | |||| |||| ||| |||| | ||| |||||||| | |||
Sbjct 174395 TTTCTTTTGTCGTGCAGCTCCTGT-GCCTCCCTCTTGTTCGCTGTCCCAAGAGATTCTTT 174453
Query 24356 AAATCTTTTACCGTTCGGCAATGTGAAACTGGCGTACCATATTTCACCTCTGCGGAAGAG 24415
|| ||||| ||| ||||| | ||| || |||||||| || | |||||| |||||||
Sbjct 174454 AAGTCTTTGCCCGCCCGGCAGCGAGAAGCTCGCGTACCAGATGTTACCTCTACGGAAGAT 174513
Query 24416 TGACATTTTCTTTCCTCTGTTATGCCATCACCCGCGCTCACCTGGACAGTATGCAGCGGA 24475
||||| || ||||||| ||| |||||| | ||||| |||||| | | |||
Sbjct 174514 AGACATGTTTTTTCCTCGAGCATG---TCACCCTCACTCACGGCGACAGTGTTGATCGGT 174570
Query 24476 GACTGAAGAGCCGCAATGCAGGCTTGTCGTGTTGTGAGGTAAGGAGATTTATTCTTAGTG 24535
| || || ||||| || ||||| || || || |||||| || || || |
Sbjct 174571 TTATTCAGTGCGGCAATACATGCTTGCCGGGTGAAGATGTAAGGGGACTTTGGTTTCGAT 174630
Query 24536 GGATCTTTGCG 24546
||||| |||||
Sbjct 174631 GGATCCTTGCG 174641
Score = 167 bits (184), Expect = 6e-37
Identities = 155/197 (79%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23289 GACTGGGACAAATTTGGGACCGATGGGTTCAGGATCGAGTCTATTTGCCGTGCGTGTTCG 23348
|| ||||||| ||||||||| || | || | |||||| ||| ||||| ||
Sbjct 175478 GAGTGGGACAGATTTGGGACAGAAACCCCAAAAATAGCGTCTATCTGCTTCGCGTGCTCC 175537
Query 23349 GTAAGGTGATTAGGTGCAAGGTGAGCATATCGACGAACCATTTCGATAGACTCCCAGCCT 23408
|| | ||||| || || || || || ||||| || ||||| ||||| |||||||||||
Sbjct 175538 GTTAAATGATTCGGCGCCAGATGCGCGTATCGCCGTACCATCTCGATCGACTCCCAGCCG 175597
Query 23409 CCCATTTCCTGTAAAACTGACAACGGGACTCCGGCTTGAACCAGCCAACTTGCCCAGGTG 23468
||||||||||| | ||||||||||||||| ||||| |||| |||||| |||||||| |||
Sbjct 175598 CCCATTTCCTGAAGAACTGACAACGGGACACCGGCCTGAATCAGCCAGCTTGCCCATGTG 175657
Query 23469 TGTCTCAAGTCGTGAAA 23485
||||||| |||||||||
Sbjct 175658 TGTCTCAGGTCGTGAAA 175674
>seq19589
Length=24186
Score = 102 bits (112), Expect = 2e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 30827 GGTTTTCACCCGTCAGAATCTGGCGGGGATCCGTCAGTAAAATCAAAACATGATCCGTCA 30886
|||||||||||| |||||||||| |||||||||| |||||| |||||||| ||||| |||
Sbjct 11404 GGTTTTCACCCGCCAGAATCTGGGGGGGATCCGTTAGTAAATTCAAAACAAGATCCATCA 11463
Query 30887 GATaaaaaaaCTTCTCGTC 30905
||||| ||||| ||| |||
Sbjct 11464 GATAATAAAACCTCTTGTC 11482
Score = 102 bits (112), Expect = 2e-17
Identities = 296/448 (66%), Gaps = 27/448 (6%)
Strand=Plus/Plus
Query 34258 CGGAGTCGCCGGACTCTTTTATGTTACG---CCCAAAACGTCGCCGCTGGGTTAACGAAA 34314
||||| ||||||| |||| | || || ||| || || ||||| | | ||| |
Sbjct 14771 CGGAGACGCCGGAATCTT--ACCTT-CGTATCCCGAAGCGCCGCCGGTACGAAAACACGA 14827
Query 34315 AGTACACGCGTTGGGTTAAGACGCAGCCGTGCGCATGTTGTGGAAAACCTGCTGATGATC 34374
| ||||| | ||||| ||| ||||| ||| | ||||| || |||||||||
Sbjct 14828 AATACACCCAATGGGTAAAGCGCCAGCCATGCTGCGGCTGTGGCAACGGGTCTGATGATC 14887
Query 34375 CCCACCACCTGATAGGCCACGGTCAGGGGGGAATGGGTACAAAAGCGCATGACCTCTTTG 34434
| |||||| | | ||| | ||| || || |||| ||||||||||||||||| || |
Sbjct 14888 CGCACCACATCACTGGCAATGGTTTTGGCGGTATGGCAACAAAAGCGCATGACCTGTTCG 14947
Query 34435 TGTTGCCTTTGTGCAGAAAGCATCACGACGAGCTGCATGCGGATACCGTGGCATTTGAAG 34494
|| | || |||||||| | ||||||| || |||||| ||||| || | ||||
Sbjct 14948 TGATCCCGCTGTGCAGACGGTGTCACGACTCACTTCATGCGAATACCCCGGATTGGGAAG 15007
Query 34495 AGAAGTATGGCTCTCAGCTGGAGCTGATA-TTTCGTTTTATCGATCGTGCGCTGGCAACT 34553
|| | || | ||| | | ||| || | || | | || || |||||||| |
Sbjct 15008 CAGAGCACGGTACACAGGAGCACCTGTTACTGACGACAT-TAGACCGCGCGCTGGCGATG 15066
Query 34554 GGCGT----GCT---GGC--------CTGATTTTGTGGAGAAATTTGATGCGTGATATTC 34598
|| || ||| ||| | | |||||||||| | |||||||||||||
Sbjct 15067 GGTGTTATCGCTACCGGCAAACAAAAATAAAAGTGTGGAGAAA-ATAATGCGTGATATTC 15125
Query 34599 AGATGGTTCTTGAGCGTTgggggggATGGGCTGCTAGTGATAATTCAGGCGTTGACTATT 34658
| |||| || | |||| || | ||| || | |||||||||||||| |||| |
Sbjct 15126 AACTGGTACTGGCTCGTTACGGCGTTTGG---GCGAAAGATAATTCAGGCGTGGACTGGT 15182
Query 34659 CTCCAATCGCAGCAGGATTTAAAGGGCT 34686
| || || || |||||||| ||||| ||
Sbjct 15183 CACCGATTGCCGCAGGATTCAAAGGCCT 15210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127000104713760
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