Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_023555.1 Length=43017 Score E Sequences producing significant alignments: (Bits) Value seq725 102 2e-17 >seq725 Length=236385 Score = 102 bits (112), Expect = 2e-17 Identities = 179/258 (69%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 6119 TATCCCGAAAATATCGTGCCTGGCCAAAGGGCGTATTATCCGAGTACCAAGTAACTATGA 6178 |||||| | || || ||| | | |||||||| | | || || || | | || || Sbjct 215364 TATCCCTCAGATTTCATGCGAGCCAAAAGGGCGCGTGGTTCGCGTTCCGACAACTTACGA 215423 Query 6179 CCCAGACACCCGCACCTATTCCGGCAATTGGGATGGGTCGTTTAAATGGGCCTACACCAA 6238 ||| | |||||| | |||||||||| ||||||||| ||||||||||||| | ||| | Sbjct 215424 CCCTGTCACCCGGTCTTATTCCGGCACTTGGGATGGAACGTTTAAATGGGCGTGGACCGA 215483 Query 6239 CAATCCGGCGTGGGTATGGTACGA---CGTATTGACTCAACCGCGGTTCGGGCTTGGTAA 6295 || ||| ||||| | | || || ||| ||| | |||||| || || || || | Sbjct 215484 TAACCCGTCGTGGATTTTCTATGACATCGTCGTGAAT-AACCGC--TTTGGTCTCGGCCA 215540 Query 6296 GCGCGTTACGGCGGCCATGCTAGATAAATGGGAGTTGTACCGCATCGCACAGCGCTGCGA 6355 ||| | || || | || | ||||| |||||| | |||||| || | || ||| || Sbjct 215541 GCGGCTCACTGCTGACAATATCGATAAGTGGGAGCTTTACCGCGTCTCGCAATACTGTGA 215600 Query 6356 TCAGATGGTGCCGGATGG 6373 || ||||||||||| || Sbjct 215601 CCAAATGGTGCCGGACGG 215618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137420380173532