Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq9405 176 8e-39 >seq9405 Length=40329 Score = 176 bits (194), Expect = 8e-39 Identities = 187/245 (76%), Gaps = 4/245 (2%) Strand=Plus/Plus Query 71269 TACAGTACCTTTAATACCAC--TAAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTC 71326 |||||||| ||| | ||| ||||||||||||| | ||| || |||||| | || | Sbjct 35640 TACAGTACTTTT--TCCCAGAATAAAAACGATCAGCTTCTTGAGCCAATGTTCTTTGGCC 35697 Query 71327 AGTCGGTTAACGTCTCACGTTATGATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTG 71386 ||||||||||||| | |||| || ||||||||| | || ||||| ||||| | Sbjct 35698 AGTCGGTTAACGTTGCCCGTTTCGACCAGCAGAAGCATGAAATCTTTGAAAAACTGATCG 35757 Query 71387 AGAAACAACTTTCATTCTTCTGGCGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCG 71446 | || || || || ||||||||||| || |||||| | |||||||| | |||||||||| Sbjct 35758 AAAAGCAGCTGTCCTTCTTCTGGCGTCCGGAAGAGATTGATGTTTCCCGCGACCGTATCG 35817 Query 71447 ACTTCCAGGGGTTGCCAGATCATGAAAAACACATCTTCGTTTCTAACCTGAAATACCAAA 71506 | || |||| |||||| ||||| ||||||||||||||| | || ||||||||||| | Sbjct 35818 ATTTTCAGGCGTTGCCGGATCACGAAAAACACATCTTCCTGAGCAATCTGAAATACCAGA 35877 Query 71507 CCCTG 71511 | ||| Sbjct 35878 CGCTG 35882 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 866594518292160