Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq828 152 6e-32 seq785 102 9e-17 seq8998 82.4 8e-11 >seq828 Length=218660 Score = 152 bits (168), Expect = 6e-32 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 61347 TTAAGTGAAAGTGCGTGAAATAACGTCGCGCTGTTGCTCTGGAGTTAGAGCATTAAAACG 61406 || ||||||||| || | ||| ||||| ||||| || || | ||| || | || ||||| Sbjct 42140 TTCAGTGAAAGTACGGGTAATCACGTCACGCTGCTGTTCAGCAGTCAGTGAGTTGAAACG 42199 Query 61407 AACGGCATAGCCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGC 61466 || ||||||||||| ||||||||||||||||| || ||||| || ||||||| ||| || Sbjct 42200 TACCGCATAGCCAGACACACGAATAGTCAGCTGTGGGTATTTCTCAGGATGTTTAACCGC 42259 Query 61467 ATCTTCTAAAGTTTCTTTAGACAGCACGTTCACGTTCAAATGCTGTCCACCTTCAACTTT 61526 |||||| | ||||| | ||| ||||| ||||||| ||||| |||||||| || Sbjct 42260 ATCTTCCAGTGTTTCACGACGCAGTACGTTAACGTTCAGGTGCTGACCACCTTCCACGCG 42319 Query 61527 AACTGTAGGCTTGGTTTCAATTCCAATTTCACGAGATTCAAA 61568 || || |||| ||| ||| | |||||| ||||||| Sbjct 42320 CACGGTCGGCTGAACTTCCATTGGCACTTCACGGTATTCAAA 42361 >seq785 Length=396209 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 74605 AATTTGGTGACCCCAGCAGGACTCGAACCTGCAACCTAGCGATTATGAGTCGCGTGCTCT 74664 ||||||||| ||| || ||||| ||||| || ||| ||||||||||||||||||||||| Sbjct 187891 AATTTGGTGGCCCTTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCGTGCTCT 187950 Query 74665 AACCAATTGAGCTATAGGGCC 74685 |||||| ||||||| |||||| Sbjct 187951 AACCAACTGAGCTAAAGGGCC 187971 >seq8998 Length=49917 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 76455 TGGCTGGGGTACCTGGACTCGAACCAGGGAATCGTAGAATCAAAATCTACTGCCTTACCA 76514 ||||||||||||||||| ||||||||||| || | | ||||||| | | ||||||||| Sbjct 24341 TGGCTGGGGTACCTGGATTCGAACCAGGGTATGCTGGTATCAAAAACCAGTGCCTTACC- 24399 Query 76515 ACTTGGCTATACCCCAA 76531 |||||| ||||||||| Sbjct 24400 GCTTGGCGATACCCCAA 24416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553878218927040