Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_023568.1
Length=246964
Score E
Sequences producing significant alignments: (Bits) Value
seq785 165 1e-35
>seq785
Length=396209
Score = 165 bits (182), Expect = 1e-35
Identities = 524/805 (65%), Gaps = 22/805 (3%)
Strand=Plus/Minus
Query 187031 GGCGATATTCATTTTCATGACCTTGACTACAGCCCATTATTCCCGCAATTCAACTGTATG 187090
||||| || |||| ||||||||| || || ||| || |||||| || ||||| |||
Sbjct 143027 GGCGAAATCCATTATCATGACCTCGATTATTCCCCGTTCTTCCCGATGTTTAACTGCATG 142968
Query 187091 CTTATTGATATCAAAGGCATGTTTGAAGGCGGTTTCAAAATGGGTAATGCTGAAATCGAA 187150
|| || || | ||||||||||| | ||||||||||||||||||||| ||||| ||
Sbjct 142967 CTGATCGACCTTAAAGGCATGTTGAATCACGGTTTCAAAATGGGTAATGCGGAAATTGAC 142908
Query 187151 GAACCAAACAGTATTAGCACTGCTGCCACTGTTGTAACTCAGATTATTCAGCAAGTAAGT 187210
||||| |||| ||| || | | || | |||||||| ||| ||
Sbjct 142907 ACGCCAAAGTCTATTTCCACCGCAACGGCCGTCACCGCGCAGATTATCGCGCAGGTCGCC 142848
Query 187211 AGCCATATCTACGGCGGTAACACGATCAATAGAATCGACGAAGTCCTAGCACCTTATGTT 187270
|||||||| |||||||| | || || || | ||||||||||| || || || |||
Sbjct 142847 AGCCATATTTACGGCGGCACGACCATTAACCGCATCGACGAAGTACTGGCGCC----GTT 142792
Query 187271 CGTAA--GTCATATT--ATAAATGGCTCGAAGTAGGTCGCGAAGAACATCCCGACTCTGA 187326
||| | | || || ||||| ||| | | |||||| | | ||
Sbjct 142791 CGTCACCGCCAGCTTCAATAAACA--TCGTCAGACTGC-CGAAGA-------GTGGCAGA 142742
Query 187327 TTCTAAA-GCTGCTATCTTTGCACGAAAGCGTGTTGAAAAGGAAACGTTCGATGCATTCC 187385
|| | | || | | |||||| | | ||| ||||| || | || || ||||
Sbjct 142741 TTGCAGATGCGGATGGCTTTGCTCACAGCCGTACCGAAAAAGAGTGTTATGACGCCTTCC 142682
Query 187386 AGACGTTTGAATATCAAGTCAATACGATGCAGACTTCAAACGGTCAGACACCATTCACGA 187445
|| || | |||||| | || |||||| |||| || | ||||| ||||| || || |
Sbjct 142681 AGTCGCTGGAATATGAGGTTAATACGCTGCACACCGCCAACGGCCAGACGCCGTTTGTCA 142622
Query 187446 CAATCAACTTCGGGTTAGGTACGTCGTGGGAAGAAAAACTTATTCAAAAAAGTATTCTTC 187505
| || || || | || || || |||||| || || || || ||||| |
Sbjct 142621 CCTTCGGTTTTGGCCTCGGCACATCCTGGGAATCGCGCCTGATCCAGCAATCAATTCTGC 142562
Query 187506 AGAATCGTATTGCAGGTCTAGGTAAGACTAAGAAAACTGCTATTTTCCCTAAGCTTGTTT 187565
|| || ||||| || || || || | | ||||| ||| | ||||| || || || |
Sbjct 142561 GTAACCGCATTGCCGGACTGGGCAAAAATCGCAAAACCGCTGTATTCCCAAAACTGGTGT 142502
Query 187566 TCACATTGAGAGACGGCGTGAACCTAAAAGAAGGCGACCCGTGCTACGCCATCAAAAAGT 187625
| | | | |||||| |||| | |||| || ||| | ||||| |||||| |
Sbjct 142501 TTGCCATCCGTGACGGCCTGAATCATAAAGCCGGTGACGCCAACTACGACATCAAGCAAC 142442
Query 187626 TAGCTCTTGAATGTGCAAGTAAGCGTATGTACCCAGACATTTTGAACTATGACAAACTAG 187685
| || || ||||| || || |||||||||||||| ||||| | || ||||| | | |
Sbjct 142441 TGGCACTGGAATGCGCCAGCAAGCGTATGTACCCGGACATCCTCAATTATGATCAGGTGG 142382
Query 187686 TTGAAACGACTGGTGGGTTTAAGTCTCCAATGGGCTGTCGCTCATTCTTGGGTGACTGGA 187745
| || || ||| ||| || | || |||||||| ||| ||| |||| | || |
Sbjct 142381 TGAAAGTCACAGGTTCGTTCAAAACGCCGATGGGCTGCCGCAGTTTCCTGGGCG--TGTA 142324
Query 187746 AGAACGAAGATGGTGAAACGGTATTCGATGGTCGTAATAACTTAGGCGTCGTCTCAATCA 187805
||| ||| |||| || | | | ||| || || ||||| | ||||| || | |
Sbjct 142323 TGAA-GAAAATGGCGAGATGATCCACGAGGGCCGCAATAATATCGGCGTGATCAGCCTGA 142265
Query 187806 ATATCCCGCGTATTGCTATTGAAGC 187830
|| | ||||||||||| | |||||
Sbjct 142264 ATCTGCCGCGTATTGCGCTGGAAGC 142240
Score = 107 bits (118), Expect = 3e-18
Identities = 201/292 (69%), Gaps = 4/292 (1%)
Strand=Plus/Minus
Query 188168 TGGAAAGAACTGACGGGCTACGGTTTCAGTCTGTACAGTACACCAAGTGAATCGCTGTGT 188227
|||||||| ||||||||||||||||| |||||||| || || || ||| |||||
Sbjct 141905 TGGAAAGACGAAACGGGCTACGGTTTCAGCCTGTACAGCACGCCGAGCGAAAACCTGTGC 141846
Query 188228 GATCGTTTCTGTCGTCTCGACCAAGAGAAATACGGTGTCATTACAGGTATCAATGACAAA 188287
|| || ||||||||||| || ||| ||| ||| | | | ||| | | ||| |||
Sbjct 141845 GACCGCTTCTGTCGTCTGGATAAAGCCGAATTCGGGCTGGTGGCCGGTGTGACTGATAAA 141786
Query 188288 GACTATTACACAAACTCGTTTCACTTAGACGTGTTCAAGAAAGTTAACCCATTTGAGAAA 188347
| || ||||| ||| || || | ||||| ||||| || || || | || |||
Sbjct 141785 GGTTACTACACCAACAGCTTCCATCTGGACGTCGAGAAGAAGGTAAATCCGTACGAAAAA 141726
Query 188348 ATTGATTTTGAA--GCTGCATACCCAATTCATGCAAACGGTGGTTTCATCTGTTATGCTG 188405
| || || ||| || | || | | | ||| || ||||| ||||||||||| |||| |
Sbjct 141725 CTCGACTTCGAAGCGCCGTATCCGCCACTCA-GC-AACGGCGGTTTCATCTGCTATGGCG 141668
Query 188406 AGTTCCCGAATATGCGAGATAACATCAAAGGTCTAGAGCGCGTATGGGATTA 188457
| | ||| || ||| | | || | |||| || || ||| ||||||||
Sbjct 141667 AATACCCTAACCTGCAACACAATCTGAAAGCGCTGGAAGACGTGTGGGATTA 141616
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 789476929335360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |