Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq223 114 4e-21 >seq223 Length=511576 Score = 114 bits (126), Expect = 4e-21 Identities = 180/258 (70%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 30133 CCACTTTCGAGTTCTGAGTGAACCCTCGACGTACAGTTGCTGACCCTTCTTTACGTGCTG 30192 ||| || || ||| |||| || |||| ||| | || ||| ||||| | || | Sbjct 459621 CCATTTACGGGTTTGCAGTGCGCCTTCGATGTAGACCTGAGAACCTTTCTTCAGGTATTC 459680 Query 30193 CCCGACGATCTCCGCCAACTTCCCGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTG 30252 || ||| || || || || ||||| |||||||| ||||||||||| || || | Sbjct 459681 GCCTGCGACTTCTGCTAATTTGCCGAACAACACCACACGGTGCCATTCCGTTTTTTCTTT 459740 Query 30253 TTGCTGGCCGGTCTGCTTGTCCTTCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCAC 30312 |||| |||||| ||||| ||||||||| || || || |||||||||| || Sbjct 459741 CTGCTCGCCGGTGGCTTTGTCACGCCAGCTCTCAGACGTTGCCAGAGTGATGTTGGCAAC 459800 Query 30313 CGCATTGCCGTTGGGCATATAGCGAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAAT 30372 ||| |||||| ||||| ||||| ||||||||| || | || || || ||||| Sbjct 459801 CGCGCCGCCGTTAGGCATGTAGCGGACTTCCGGGTCTTGTCCCAGATTACCGACGAGAAT 459860 Query 30373 GACTTTGTTAACGCCTCT 30390 |||||||| |||||||| Sbjct 459861 AACTTTGTTTACGCCTCT 459878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145519354625696