Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq9405 138 1e-27 >seq9405 Length=40329 Score = 138 bits (152), Expect = 1e-27 Identities = 179/245 (73%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 122164 TCTGATACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGAAGATTCATGTAG- 122222 |||| || ||||| ||||| | ||||||||| || ||||||||||| | | | || | Sbjct 35877 TCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCA-ACGCCTGAAAA 35819 Query 122223 TCAATTCGGTCACGGGTCACGTTCACCTCTTCCGGACGCCAGAAGAATGCCAGTTGCTTT 122282 || || ||||| |||| || | | ||||||||||||||||||||| | ||| |||||| Sbjct 35818 TCGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGCTTT 35759 Query 122283 TCGATCAGCTTTTCGAACTTAGCGTGTTTTTGCTGGTCATAACGAGAAACGTTCGGCGTC 122342 |||||||| ||||| || | | || || |||||||| |||| | |||||| || | Sbjct 35758 TCGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACCGAC 35699 Query 122343 TCACCGAGGAACATCGGCTGAGTCAGAAAGTCGAACTTGTTCTGGTTAAACGTGCTGTAA 122402 | || | |||||| |||| | || ||| || |||||| ||| || |||||| Sbjct 35698 TGGCCAAAGAACATTGGCTCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGTACTGTAA 35639 Query 122403 GACAT 122407 | ||| Sbjct 35638 GCCAT 35634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 485610608669760