Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_023743.1 Length=47180 Score E Sequences producing significant alignments: (Bits) Value seq725 87.8 5e-13 >seq725 Length=236385 Score = 87.8 bits (96), Expect = 5e-13 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 28215 CCAACGACACCGCCGTTTGCGTATCCGCGCATCAACTTGTACAGGTTGTCTACGCCAATC 28274 ||||| | |||||||| ||| || || | ||||| |||||||| || ||||| ||| Sbjct 209527 CCAACCAGACCGCCGTCTGCATAACCCCTCATCATGGAATACAGGTTATCGACGCCGATC 209468 Query 28275 CTTGAAGTTGCCTCCTTCGTAAACACGAATTCACCACGATGCACCGTACCAGCTGGTTCA 28334 | || |||||||| || | |||||||| || ||||| || |||| ||||| | Sbjct 209467 CGGCTGGTCGCCTCCTTGGTCATGACGAATTCGCCGCGATGAACGATACCGGCTGGCGCG 209408 Query 28335 TACTTACCTCCGTTACCAGTGTAGCCACCAGATGCAAA 28372 ||||| | || | || || ||||||||||| |||| Sbjct 209407 AACTTATCGCCTTCGCCGGTATAGCCACCAGAATCAAA 209370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150731091047736