Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq9405 152 5e-32 >seq9405 Length=40329 Score = 152 bits (168), Expect = 5e-32 Identities = 185/249 (74%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 119068 TCTGGTACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGCAGATTCATGTAG- 119126 ||||||| ||||| ||||| | ||||||||| || ||||||||||||| | | || | Sbjct 35877 TCTGGTATTTCAGATTGCTCAGGAAGATGTGTTTTTCGTGATCCGGCA-ACGCCTGAAAA 35819 Query 119127 TCGATACGGTCACGGGTCACGTTAACTTCTTCCGGACGCCAGAAGAACGCCAGTTGCTTC 119186 ||||||||||| |||| || | || |||||||||||||||||||| | ||| ||||| Sbjct 35818 TCGATACGGTCGCGGGAAACATCAATCTCTTCCGGACGCCAGAAGAAGGACAGCTGCTTT 35759 Query 119187 TCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTGGTCATAGCGAGAAACGTTCGGTGTC 119246 |||||||| || || || | | || ||||||||||| | || | |||||| | | Sbjct 35758 TCGATCAGTTTTTCAAAGATTTCATGCTTCTGCTGGTCGAAACGGGCAACGTTAACCGAC 35699 Query 119247 TCGCCGAGGAACATCGGCTGAGTCAGGAAG----TCGAATTTGTTCTGGTTGAAAGTGCT 119302 | ||| | |||||| ||| ||| |||| ||| ||| |||||| ||||| || Sbjct 35698 TGGCCAAAGAACATTGGC----TCAAGAAGCTGATCGTTTTTATTCTGGGAAAAAGTACT 35643 Query 119303 GTAAGACAT 119311 ||||| ||| Sbjct 35642 GTAAGCCAT 35634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476779813450080