Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01] 68,834 sequences; 1,345,859,447 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq223 147 6e-31 seq25848 87.8 5e-13 >seq223 Length=511576 Score = 147 bits (162), Expect = 6e-31 Identities = 180/246 (73%), Gaps = 0/246 (0%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| |||||||| |||||||| || || | | ||| | || || ||||| || || Sbjct 459887 ATGGCCAGCAGAGGCGTAAACAAAGTTATTCTCGTCGGTAATCTGGGACAAGACCCGGAA 459828 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || ||||| | || | ||||||||| || || |||||||| | |||||||||||| Sbjct 459827 GTCCGCTACATGCCTAACGGCGGCGCGGTTGCCAACATCACTCTGGCAACGTCTGAGAGC 459768 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || || ||||| ||| ||||| ||||| || |||||||| || ||| Sbjct 459767 TGGCGTGACAAAGCCACCGGCGAGCAGAAAGAAAAAACGGAATGGCACCGTGTGGTGTTG 459708 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 || || || | || ||||| || ||||||||||| ||||| ||||| || || || Sbjct 459707 TTCGGCAAATTAGCAGAAGTCGCAGGCGAATACCTGAAGAAAGGTTCTCAGGTCTACATC 459648 Query 38434 GAAGGC 38439 |||||| Sbjct 459647 GAAGGC 459642 >seq25848 Length=116905 Score = 87.8 bits (96), Expect = 5e-13 Identities = 159/233 (68%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 38212 AACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAGGTGCGCTATCTACCAAGC 38271 ||||| || ||| | | ||| | | ||||| | || ||| ||||||| | || | | Sbjct 107998 AACAAAGTCATCATCGTGGGTAATTTAGGTCAGGCACCGGAGCTGCGCTACATGCCGAAC 108057 Query 38272 GGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTTTGGCGGGATAAGCAAACC 38331 |||||||| ||||| | | | || | || ||||| || ||||| || || ||| Sbjct 108058 GGCGGCGCGGTGGCGAGCCTGACGCTGGCCACGTCCGAAAACTGGCGTGACAAAGCCACC 108117 Query 38332 GGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTGTTTGGGAAGCTGGCTGAA 38391 || ||| || ||||| ||||||||||| || |||| || |||||||| ||| Sbjct 108118 GGCGAGCAGCGCGAAAAAACCGAGTGGCACCGCGTGGTCGTGTTCGGAAAGCTGGCCGAA 108177 Query 38392 GTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATTGAAGGCCAGCT 38444 |||| || |||||||| || || | | || || || ||||||||||| Sbjct 108178 ATTGCCGGTGAATACCTGACCAAGGGCGCAAAAGTCTACATCGAAGGCCAGCT 108230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132790567695548