Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_024450.1
Length=204054
Score E
Sequences producing significant alignments: (Bits) Value
seq11224 95.1 2e-14
seq7028 95.1 2e-14
seq205 89.7 7e-13
seq1417 84.2 3e-11
>seq11224
Length=41968
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 15949 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 15890
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 15889 CCCGCCGGGGAG 15878
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 15949 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 15890
Query 11789 CCCGACGAGGAG 11800
|||| || ||||
Sbjct 15889 CCCGCCGGGGAG 15878
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 15878 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 15937
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 15938 TACTACCGAGGAT 15950
>seq7028
Length=60819
Score = 95.1 bits (104), Expect = 2e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||||||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 47051 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 47110
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 47111 CCCGCCGGGGAG 47122
Score = 93.3 bits (102), Expect = 6e-14
Identities = 65/73 (89%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788
|||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||||||
Sbjct 47051 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 47110
Query 11789 CCCGACGAGGAGG 11801
|||| || |||||
Sbjct 47111 CCCGCCGGGGAGG 47123
Score = 87.8 bits (96), Expect = 2e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412
|||| || |||||| |||||||||||||||||| | |||| |||||||| | |||||||
Sbjct 47122 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 47063
Query 139413 TACTAACGAGGAT 139425
||||| |||||||
Sbjct 47062 TACTACCGAGGAT 47050
>seq205
Length=216154
Score = 89.7 bits (98), Expect = 7e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717
|||||| |||||| ||||| ||||| |||| ||||| | |||||||||||||||||||||
Sbjct 118895 TCCTCGGTAGTATGGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 118954
Query 8718 CCCGACGAGGAG 8729
|||| || ||||
Sbjct 118955 CCCGCCGGGGAG 118966
Score = 87.8 bits (96), Expect = 2e-12
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Plus
Query 11729 GTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATT 11787
||||||| |||||| |||||| |||| |||| ||||| | ||||||||||||||||||||
Sbjct 118894 GTCCTCGGTAGTATGGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATT 118953
Query 11788 CCCCGACGAGGAG 11800
||||| || ||||
Sbjct 118954 CCCCGCCGGGGAG 118966
>seq1417
Length=110962
Score = 84.2 bits (92), Expect = 3e-11
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 8646 CCGATGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACC 8705
||||||| ||| | || |||||||||||| ||||| |||| ||||| | |||||||||
Sbjct 65693 CCGATGCAGTAT-CTTCAGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACC 65751
Query 8706 GGGGTTCGATTCCCCG 8721
||||||||||||||||
Sbjct 65752 GGGGTTCGATTCCCCG 65767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 652283076012960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |