Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq8521 118 7e-22
seq48539 113 3e-20
seq8056 100 2e-16
seq15643 87.8 1e-12
>seq8521
Length=40141
Score = 118 bits (130), Expect = 7e-22
Identities = 165/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | ||||| || || || ||||||||| |||||||| |||||
Sbjct 2929 CCACCACGCAGACGGAGGACCAAGTGAAGGGTCGACTCTTTTTGGATGTTGTAGTCGGAA 2870
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || ||| | || |||||||| ||||| ||||| ||||| | |||||||||| | ||
Sbjct 2869 AGGGTACGTCCATCTTCCAATTGCTTTCCTGCAAAGATCAACCTCTGCTGATCTGGGGGG 2810
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701
| |||||| || || || || ||||| ||| ||| ||||| | || ||
Sbjct 2809 ATACCTTCCTTATCCTGGATCTTGGCTTTCA-CATTCTCAATTGTGTCTGAGGGCTCAAC 2751
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | ||||| || || || || | ||||| |||||||||||||||
Sbjct 2750 CTCTAGGGTGATGGTCTTCCCGGTCAGGGTTTTGACAAAGATCTGCATA 2702
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||||| || | ||| || ||| ||| || || |||||||| |||||
Sbjct 2474 ACCACCACGCAGACGTAGGACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCGGA 2415
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
||| ||||| | || || | || ||||||||||| ||||| | |||||||||| | ||
Sbjct 2414 GAGAGTGCGGCCATCTTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGATCTGGGGG 2355
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||||| | | |||| || | |||| | ||| |
Sbjct 2354 GATACCTTCCTTGTCCTGGATTTT-GGCCTTGACATTCTCAATACTGTCCGAGGGTTCAA 2296
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | || || || || || || || || || |||||||||||||||
Sbjct 2295 CCTCCAGTGTAATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGCATA 2246
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | || | ||| || || |||||| || |||||||| || ||
Sbjct 2702 ACCACCACGCAGACGAAGGACGAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGA 2643
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| | || |||| || |||||||| || ||||| | |||||||||| | ||
Sbjct 2642 AAGGGTACGTCCATCTTCCAGCTGCTTTCCGGCGAAGATCAACCTCTGCTGATCTGGGGG 2583
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| || || || ||||| || | ||||||| | || |
Sbjct 2582 AATACCTTCCTTGTCTTGGATCTTGGCCTT-AACATTCTCTATGGTGTCGGAGGGCTCAA 2524
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | || || || ||||||||||||
Sbjct 2523 CCTCGAGGGTGATTGTCTTCCCAGTCAGAGTCTTGACGAAGATCTGCATA 2474
>seq48539
Length=7100
Score = 113 bits (124), Expect = 3e-20
Identities = 169/236 (72%), Gaps = 3/236 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||| | ||| | |||||| || || ||| || ||||| || ||||||||||||
Sbjct 6485 CCTCCTCGGAGACGGAGCACCAAGTGGAGGGTGGATTCCTTTTGGATATTGTAATCGGAG 6426
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || |||| ||||| || || || || ||||||| | |||||||||| | ||
Sbjct 6425 AGGGTTCGGCCGTCTTCCAACTGCTTGCCAGCGAAAATCAGCCTCTGCTGATCTGGAGGG 6366
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| |||||||||||| |||||| || | || | || | || ||| | |||||
Sbjct 6365 ATACCTTCTTTGTCTTGAATTTT-TGCCTTCACGTTTTCAATCGTATCGGAAGGCTCCAC 6307
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTG 33757
|| | || ||||| || || || || ||||| || || |||||||| |||| ||
Sbjct 6306 CTCCAAAGTTATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT-GTTGTTG 6252
Score = 89.7 bits (98), Expect = 3e-13
Identities = 166/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || ||||| | || ||| | ||||| || || || |||||||| ||
Sbjct 6725 AAAATCTGCATTCCACCACGCAGACGGAGGACCAAGTGAAGGGTAGATTCTTTTTGGATA 6666
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
||||| ||||| || |||||| | || ||||| || ||||| || || ||||| | ||||
Sbjct 6665 TTGTAGTCGGAAAGGGTGCGTCCATCCTCCAACTGCTTTCCTGCGAAGATCAACCTCTGC 6606
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC 33689
|||||| | || | ||||| ||||| || || ||| | ||| ||| |||||
Sbjct 6605 TGATCTGGAGGGATTCCTTCCTTGTCTTGGATCTTGGCTTTGA-CATTTTCAATTGTGTC 6547
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || || | || || || || || || | || ||||| |||||||||||
Sbjct 6546 AGAAGGCTCAACTTCTAGAGTAATAGTCTTTCCGGTAAGGGTCTTTACGAAGATCTGCAT 6487
>seq8056
Length=34938
Score = 100 bits (110), Expect = 2e-16
Identities = 167/239 (70%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||| | ||| | ||||||||| || || ||| || || || |||||||||||
Sbjct 32129 CCTCCTCGGAGACGGAGCACCAAATGGAGGGTCGACTCCTTCTGGATATTGTAATCGGAA 32070
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || ||||||||||| || || || | ||| || ||||| | ||
Sbjct 32069 AGGGTGCGACCATCTTCTAATTGTTTTCCAGCGAAGATAAGACGTTGTTGATCCGGAGGA 32010
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| ||||||| | | |||| || | || || | || ||
Sbjct 32009 ATTCCTTCTTTGTCTTGAATTTTC-GCCTTTACATTTTCGATCGTATCTGAGGGCTCAAC 31951
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGTTGGTGTGT 33760
|| | |||||||| || || || || ||||| || || |||||||| ||| | |||
Sbjct 31950 CTCCAATGTGATCGTCTTTCCGGTCAAAGTTTTCACGAAAATCTGCATGATTGATCTGT 31892
>seq15643
Length=27379
Score = 87.8 bits (96), Expect = 1e-12
Identities = 160/232 (69%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| |||| | || | ||| || || || ||| ||| || || || |||||||| ||
Sbjct 12274 ACCTCCTCGGAGTCGAAGCACTAAGTGAAGTGTGGACTCCTTCTGGATATTGTAATCTGA 12215
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| | || || | ||||||||||| || ||||| | |||||||||| | ||
Sbjct 12214 AAGGGTACGTCCATCCTCGAGCTGTTTTCCGGCGAAGATCAACCTCTGCTGATCTGGAGG 12155
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||||||||||| || || | || |||| || | ||||| | || |
Sbjct 12154 GATTCCTTCTTTGTCTTGGATCTT-GGCTTTGACATTTTCGATAGTGTCAGAGGGCTCTA 12096
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752
| |||| ||||| ||||| || || | || || || || |||||||| ||
Sbjct 12095 CCTCAAGGGTGATGGTTTTCCCCGTAAGGGTCTTCACGAAAATCTGCATTGT 12044
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328428245489280
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