Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limnephilus_20lunatus_20[genbank_20GCA_5F000648945.1_202014-05-01]
68,834 sequences; 1,345,859,447 total letters
Query= NC_025414.1
Length=178171
Score E
Sequences producing significant alignments: (Bits) Value
seq828 163 3e-35
seq785 138 1e-27
seq35 116 4e-21
seq9405 102 9e-17
>seq828
Length=218660
Score = 163 bits (180), Expect = 3e-35
Identities = 170/223 (76%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 50982 CGTGAAGTTGATATTGAGTTTCAACCGACTGTTAAAGTTGAAGGTGGACAGCACCTAAAC 51041
|||||||| || || |||| ||||| || || |||||||| |||||||| |||
Sbjct 42352 CGTGAAGTGCCAATGGAAGTTCAGCCGACCGTGCGCGTGGAAGGTGGTCAGCACCTGAAC 42293
Query 51042 GTGAATGTGCTACGTCGCGAAACCCTGAAAGATGCTGTGAAACATCCTGAGAAGTACCCA 51101
|| || || || ||||| ||||| ||| ||||||| || |||||||||||||| ||||||
Sbjct 42292 GTTAACGTACTGCGTCGTGAAACACTGGAAGATGCGGTTAAACATCCTGAGAAATACCCA 42233
Query 51102 CAGTTAACGATCCGCGTTTCAGGTTATGCAGTTCGCTTTAATGCACTGACTCCAGAACAA 51161
||| | || || || || || || ||||| || || || || |||||||| | |||||
Sbjct 42232 CAGCTGACTATTCGTGTGTCTGGCTATGCGGTACGTTTCAACTCACTGACTGCTGAACAG 42173
Query 51162 CAGCGCGACGTTATCGCCAGAACCTTTACGGAAAGCATGTAAT 51204
||||| ||||| || || | || || || |||||| ||||||
Sbjct 42172 CAGCGTGACGTGATTACCCGTACTTTCACTGAAAGCCTGTAAT 42130
>seq785
Length=396209
Score = 138 bits (152), Expect = 1e-27
Identities = 756/1192 (63%), Gaps = 74/1192 (6%)
Strand=Plus/Minus
Query 154259 CAACGAGAACGCGAACAAAGAC-GCAAGGGTTTTCCCGACACAGCGCGATCTGTTGGCGG 154317
||||||||| || ||||||||| |||| | | ||||||| ||||| || ||| ||||||
Sbjct 143154 CAACGAGAATGCCAACAAAGACAGCAAAG-TGATCCCGACCCAGCGTGACCTGCTGGCGG 143096
Query 154318 GTATCGTAGCGAAACACTTCGCACGTAACCACATTCTACCAAAACACATCGTAGAAGCGC 154377
|||| || || || || | ||| | || ||| |||| | |||| ||||
Sbjct 143095 GTATTGTCGCCAAGCATTACGCCAAACAGCATATTTTACCGCGTGATGTCGTGCTGGCGC 143036
Query 154378 ATGATTCTGGTGATATCCATTATCATGATCTGGATTACAGCCCGTTCACGCCATACACAA 154437
|||| ||| || |||||||||||||| || ||||| ||||||| || |
Sbjct 143035 ATGAGCGTGGCGAAATCCATTATCATGACCTCGATTATTCCCCGTTCTTCCCGATGTTTA 142976
Query 154438 ACTGCTGTCTGGTGGATTTGAAAGGTATGCTGGCTAATGGCTTCAAGATGGGTAACGCAG 154497
||||| ||| | || | ||||| ||| || | | || ||||| |||||||| || |
Sbjct 142975 ACTGCATGCTGATCGACCTTAAAGGCATGTTGAATCACGGTTTCAAAATGGGTAATGCGG 142916
Query 154498 ACATCGAACCCCCGAAATCAATCGGTGTTGCGACTGCTCTTATGGCACAGATCACCGCAC 154557
| || || | || || || || || || || | | || ||||| | ||| |
Sbjct 142915 AAATTGACACGCCAAAGTCTATTTCCACCGCAACGGCCGTCACCGCGCAGATTATCGCGC 142856
Query 154558 AGATTGCTTCTCACCAGTACGGCGGGACAACCTTTGCAAACG--TTGATAAAGTGCTGGC 154615
|| | || || |||||||| || ||| || || || | || |||| |||||
Sbjct 142855 AGGTCGCCAGCCATATTTACGGCGGCACGACCATT--AACCGCATCGACGAAGTACTGGC 142798
Query 154616 TCCGTATGCAGAAATGACA--TATGAAAAGCATGTTAAGGATGCTAAAAAGTATAAAATT 154673
||| | | | | || | | || ||| | || ||| || ||| | |||
Sbjct 142797 GCCG--TTCGTCACCGCCAGCTTCAATAAACATCGTCAGACTGCCGAAGAGTGGCAGATT 142740
Query 154674 TC-GTT--GGATCGTACATATGCGATGGAAAAG----ACTGAAAAAGATGTGTT-TGATG 154725
| | | |||| | | ||| | || || |||||||| ||||| ||| |
Sbjct 142739 GCAGATGCGGATGG---CTTTGC----TCACAGCCGTACCGAAAAAGA-GTGTTATGACG 142688
Query 154726 CTTTCCAATCGTATGAATACGAAGTTAACACGCTGCATACTGCCAACGGACAAACACCTT 154785
| ||||| ||| ||||| || ||||| |||||||| || |||||||| || || || |
Sbjct 142687 CCTTCCAGTCGCTGGAATATGAGGTTAATACGCTGCACACCGCCAACGGCCAGACGCCGT 142628
Query 154786 TCGTTACTATTACTTTCGGTACTGGTAC-----GGGAATGTTTGAACGAATGATCCAGAA 154840
| || || | ||| || || || |||||| || |||||||| |
Sbjct 142627 TTGTCACCTTCGGTTTTGGCCTCGGCACATCCTGGGAAT-----CGCGCCTGATCCAGCA 142573
Query 154841 AGCGATTCTGAAAAACCGTATTCGTGGTCTGGGTAAACAAGGTATTACCCCTGTGTTCCC 154900
| | |||||| ||||| ||| || ||||| ||| | | | ||| |||| |||||
Sbjct 142572 ATCAATTCTGCGTAACCGCATTGCCGGACTGGGCAAAAATCGCAAAACCGCTGTATTCCC 142513
Query 154901 TAAACTGGTCATGTTT---ATGGAAAAAGGTGT-AAACATGAATCCTGGGGATCGTAACT 154956
||||||| ||||| || | || | || ||| || || || || ||||
Sbjct 142512 AAAACTGG---TGTTTGCCATCCGTGACGGCCTGAATCATAAAGCC-GGTGACGCCAACT 142457
Query 154957 ATGACATCAAACAATTGGCTCTGGAATGCGCTTCGAAACGTATGTACCCAGATATC---- 155012
| |||||||| ||| |||| ||||||||||| || ||||||||||| || |||
Sbjct 142456 ACGACATCAAGCAACTGGCACTGGAATGCGCCAGCAAGCGTATGTACCCGGACATCCTCA 142397
Query 155013 ATTA-GTTCGGCTAATAACCGCCTTATCACTGGTTCTAGCGTTCCTGTATCTCCTATGGG 155071
|||| | || | | | | | |||| |||| ||||| | | || |||||
Sbjct 142396 ATTATGATCAGGTGGTGAAAG-----TCACAGGTT----CGTTC--AAAACGCCGATGGG 142348
Query 155072 TTGTCGCAGTTTCCTTAATGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACG 155131
|| ||||||||||| |||| |||| || || || | || | || || ||
Sbjct 142347 CTGCCGCAGTTTCCTGGGCGTGT---ATGAAGAAAATGGCGAGATGATCCACGAGGGCCG 142291
Query 155132 TAATAACTTGGGTGTGGTGACAATTAACCTCCCGCGTATTGCTCTTGAAGCACANNNNNN 155191
||||| | || ||| | | | || || ||||||||||| || ||||| |
Sbjct 142290 CAATAATATCGGCGTGATCAGCCTGAATCTGCCGCGTATTGCGCTGGAAGCGAA------ 142237
Query 155192 NNNNNNNNNNNNNNNNNCTTTTTGGCGTATTCTTGATGATCGTCTGGGTTTGTGTTTTGA 155251
| || ||| | || || || ||| || || |
Sbjct 142236 ---CCGCGACGAAGCGGCGTTCTGGGCACTGCTCGACGAGCGTTTGCTGCTGGCGAAGAA 142180
Query 155252 AGCCCTGATGACTCGAATTGATAGCCTACGTGGTGTTAAAGCCAGCGTTGCGCCTATCCT 155311
||| |||||||| || |||| | || || | |||||| |||| ||||| |||||
Sbjct 142179 AGCGCTGATGACCCGCATTGCACGTCTGGAAGGCATCAAAGCCCGCGTGGCGCCAATCCT 142120
Query 155312 GTACACAGAAGGTGCATTTGGTGTCCGTCTGAATCCTGATGATGA-AATCCTGGAACTGT 155370
||||| |||||||| | ||||| || ||||| |||| || || | | | || | | |
Sbjct 142119 GTACATGGAAGGTGCGTGCGGTGTGCGCCTGAAAGCTGACGACGATATTTCCGGCA-TCT 142061
Query 155371 TCAAAAATGGGCGTAGCTCTATCAGTCTGGGATACATCGGACTGCATGAAAC 155422
|||||||||| ||| ||| || || |||||||| || ||||||||||
Sbjct 142060 TCAAAAATGGCCGTGCCTCGATTTCGCTCGGATACATTGGCGTGCATGAAAC 142009
>seq35
Length=455554
Score = 116 bits (128), Expect = 4e-21
Identities = 166/234 (71%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 40093 ATCATCGTTTCCGCATGGAACCCTGTTGATCTGGATAAAATGGCATTGCGTCCGTGTCAC 40152
|| ||||| || ||||||||| | || |||||||| ||||| || || || |||
Sbjct 112509 ATTATCGTGTCTGCATGGAACGTGGGCGAACTGGATAAGATGGCGCTGGCACCTTGCCAC 112568
Query 40153 TGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCG 40212
||||||||||||| || | |||||||| |||| ||| ||| ||||| ||
Sbjct 112569 GCTTTCTTCCAGTTCTATGTGGCCGACGGTAAATTGTCCTGCCAGCTGTACCAGCGCTCA 112628
Query 40213 GTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGCATATT 40272
||| ||||| | || |||||||||||||||||| |||||| || ||| ||||||
Sbjct 112629 TGCGATATCTTCCTCGGCTTGCCGTTCAATATCGCCAGCTACGCACTGCTGGTGCATATG 112688
Query 40273 ATCGCTGATATTTGCGGGTACGAAGTAGGTGATCTGGTTTGGACAGGTGGTGAT 40326
|| || | |||| ||||| |||||| | || ||||| ||||| |||
Sbjct 112689 ATGGCGCAACAATGCGACCTTGAAGTGGGTGATTTTGTCTGGACGGGTGGCGAT 112742
>seq9405
Length=40329
Score = 102 bits (112), Expect = 9e-17
Identities = 275/413 (67%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 42362 ATCAAAAAATATGGCTTGCGTAACTCAACTCTTTCCGCTTTAATGCCATGTGAGAGTAGT 42421
||||||| | ||| |||||||||| || || || || | ||||| | |||| |
Sbjct 35094 ATCAAAACGCACGGCCTGCGTAACTCCACGCTGTCTGCGCTGATGCCGTCCGAGACCTCT 35153
Query 42422 TCTCAAGTAAGCAACTCAACAAACGGGATTGAACCGCCTCGCGGTCCTGTGAGTGTGAAA 42481
|| || | |||| | || ||||| || || || || ||||| | | | ||| | |||
Sbjct 35154 TCGCAGATCTCCAACGCTACCAACGGTATCGAGCCACCGCGCGGCCATATCAGTATTAAA 35213
Query 42482 TCTTCGAAAGAAGGT-TCATTCAACCAGGTAGTACCGAACCA-GAACGATCAGATTGATT 42539
| |||||||| || || | | | |||| || ||| | | || || || || |||
Sbjct 35214 GCGTCGAAAGACGGGATCCTGCGTC-AGGTCGTGCCGGAGTATGAGCG-TCTGAAAGATC 35271
Query 42540 TCTATGATTATCTCTGGACAATGGCAAAACGCGGTAATAAAGGTTATCTGTCTCATGTTG 42599
|| || || ||| ||| | || || | || |||||| | ||||
Sbjct 35272 AGTACGAACTGCTGTGGGATATGCCGAACAACG------ACGGCTATCTGCAACTGGTTG 35325
Query 42600 CTGTTATGCAGAAGTTTGTTGATCAAGCGATCTCTGCAAACACCAACTATGATCCGGCTA 42659
|| |||||||| || | ||||| ||||| || | |||||||||||||| ||| |
Sbjct 35326 GCGTGATGCAGAAATTCATCGATCAGGCGATTTCGTCCAACACCAACTATGACCCGTCGC 35385
Query 42660 ACTTCCCAGATGGTAAAGTGAAATCTGAAACCATCATTGAT-GACCTGCTTTATGCGAAC 42718
|||||| | |||||||| |||||| | |||| ||| |||| || ||
Sbjct 35386 GCTTCCCGAACAGTAAAGTGCCGA-TGAAACAGTTGTTGAAAGACTTGCTGACAGCCTAC 35444
Query 42719 TACTACGGCGTGAAAACTCTGTATTATCACAACACCCGCGACGGTGCAGGTGA 42771
| | ||||| ||||| ||||||||||| ||||||||||||||||| | |||
Sbjct 35445 AAATTTGGCGTCAAAACGCTGTATTATCAGAACACCCGCGACGGTGCTGATGA 35497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 569528741229840
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